RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 DTD1Q8TEA8 209 aa10.78□□□□□ -0.68
SPG11-201ENST00000261866 OR8B2Q96RD0 313 aa10.78□□□□□ -0.68
SPG11-201ENST00000261866 A1L4Q6 167 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 GABRB1P18505 474 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 ORM2P19652 201 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 PTGFRP43088 359 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 LYZP61626 148 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 BTF3L4Q96K17 158 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 CXXC4Q9H2H0 198 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 FXYD1O00168 92 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 F2RL2O00254 374 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 PSMB6P28072 239 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 G6PCP35575 357 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 NSUN5P2Q63ZY6 315 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 CNTD2Q9H8S5 307 aa10.77□□□□□ -0.68
SPG11-201ENST00000261866 PYCARD-AS1I3L0S3 204 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 OR8B12Q8NGG6 310 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 TTTY12Q9BZ98 90 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 PCM1Q15154 2024 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 LINC01387J3KSC0 135 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 ISXQ2M1V0 245 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 OR13D1Q8NGV5 346 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 LILRB1Q8NHL6 650 aaPredicted RBP10.77□□□□□ -0.69
SPG11-201ENST00000261866 ZNF727A8MUV8 499 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 H3BVH4 76 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 IL11P20809 199 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 SLC35E4Q6ICL7 350 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 JMJD6Q6NYC1 403 aaPredicted RBP10.77□□□□□ -0.69
SPG11-201ENST00000261866 RPUSD3Q6P087 351 aaKnown RBP10.77□□□□□ -0.69
SPG11-201ENST00000261866 D2HGDHQ8N465 521 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 TMEM140Q9NV12 185 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 IL36GQ9NZH8 169 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 PPP5D1E7EU14 171 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 PRR35P0CG20 571 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 LYG2Q86SG7 212 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 MSRB3Q8IXL7 192 aa10.77□□□□□ -0.69
SPG11-201ENST00000261866 SIRT3Q9NTG7 399 aaPredicted RBP10.77□□□□□ -0.69
SPG11-201ENST00000261866 SMAD7O15105 426 aaKnown RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 KIAA0040Q15053 153 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 ZNF260Q3ZCT1 412 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 DGAT2L6Q6ZPD8 337 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 LINC00052Q96N35 136 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 TMPRSS5Q9H3S3 457 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 COL4A1P02462 1669 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 TO15178 435 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 SNRPCP09234 159 aaKnown RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 TSPO2Q5TGU0 170 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 RAB1CQ92928 201 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 TMEFF2Q9UIK5 374 aaPredicted RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 POLR2AP24928 1970 aaKnown RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 K7ESF4 209 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 ETV6P41212 452 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 CD276Q5ZPR3 534 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 PMS2CLQ68D20 193 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 OR1B1Q8NGR6 318 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 COL4A5P29400 1685 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 BCORQ6W2J9 1755 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 JUNBP17275 347 aaPredicted RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 GAB4Q2WGN9 574 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 RNASEKQ6P5S7 137 aaKnown RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 OR5AP2Q8NGF4 316 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 RBPMSQ93062 196 aaKnown RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 GON7Q9BXV9 100 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 SCN2AQ99250 2005 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 DUS4LO95620 317 aaKnown RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 HOXC4P09017 264 aaPredicted RBP10.76□□□□□ -0.69
SPG11-201ENST00000261866 ZNF141Q15928 474 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 C9orf40Q8IXQ3 194 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 PPP1R1CQ8WVI7 109 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 AP5S1Q9NUS5 200 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 BRWD1Q9NSI6 2320 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 ZFPL1O95159 310 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 ETFRF1Q6IPR1 90 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 ZNF441Q8N8Z8 693 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 C17orf47Q8NEP4 570 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 FOXJ3Q9UPW0 622 aa10.76□□□□□ -0.69
SPG11-201ENST00000261866 OR4A8P0C604 315 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 PRRX1P54821 245 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 WDR89Q96FK6 387 aaPredicted RBP10.75□□□□□ -0.69
SPG11-201ENST00000261866 IGKV3D-11A0A0A0MRZ8 115 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 IGKV3-11P04433 115 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 GABRA1P14867 456 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 EVX1P49640 407 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 SUMO1P63165 101 aaKnown RBP10.75□□□□□ -0.69
SPG11-201ENST00000261866 DHODHQ02127 395 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 MESTQ5EB52 335 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 NTMQ9P121 344 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 TFPI2P48307 235 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 INPP5JQ15735 1006 aaPredicted RBP10.75□□□□□ -0.69
SPG11-201ENST00000261866 ECSCRQ19T08 205 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 SCARB1Q8WTV0 552 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 ZMIZ1Q9ULJ6 1067 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 LIPGQ9Y5X9 500 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 TRIP12Q14669 1992 aaPredicted RBP10.75□□□□□ -0.69
SPG11-201ENST00000261866 E5RGE8 158 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 MGPP08493 103 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 PSMB2P49721 201 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 CALHM3Q86XJ0 350 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 OR4D11Q8NGI4 311 aa10.75□□□□□ -0.69
SPG11-201ENST00000261866 C2orf50Q96LR7 162 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms