RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 FOLR1P15328 257 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 PNLIPP16233 465 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 THEM4Q5T1C6 240 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 CRIP3Q6Q6R5 217 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 SLC38A9Q8NBW4 561 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 MRPL13Q9BYD1 178 aaKnown RBP13.89□□□□□ -0.19
LMNB1-201ENST00000261366 SLC34A2O95436 690 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 CTSDP07339 412 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-201ENST00000261366 PGA4P0DJD7 388 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 PGA3P0DJD8 388 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 ERVFRD-1P60508 538 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 RUNX1Q01196 453 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 FAM69BQ5VUD6 431 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF574Q6ZN55 896 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-201ENST00000261366 FAM89BQ8N5H3 189 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 AK3Q9UIJ7 227 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 CCDC187A0A096LP49 1063 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 IGHV3-15A0A0B4J1V0 119 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 GATCO43716 136 aaKnown RBP13.89□□□□□ -0.19
LMNB1-201ENST00000261366 GPR137BO60478 399 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 CST7O76096 145 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 TRGC2P03986 189 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 HEXBP07686 556 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 HOXA5P20719 270 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF41P51814 821 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-201ENST00000261366 ZP4Q12836 540 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 SLC39A7Q92504 469 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 HS3ST3B1Q9Y662 390 aa13.89□□□□□ -0.19
LMNB1-201ENST00000261366 ANKUB1A6NFN9 424 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF726A6NNF4 738 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 SERPINE3A8MV23 424 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF43P17038 809 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 BLKP51451 505 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 AFF3P51826 1226 aaKnown RBP13.88□□□□□ -0.19
LMNB1-201ENST00000261366 MTCP1P56278 107 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 C17orf67Q0P5P2 114 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 SLC22A25Q6T423 547 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 CYB561D1Q8N8Q1 229 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 PNRC2Q9NPJ4 139 aaKnown RBP13.88□□□□□ -0.19
LMNB1-201ENST00000261366 FAM86C1Q9NVL1 165 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 ALKBH4Q9NXW9 302 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 PPP4R1LQ9P1A2 415 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 SLC7A11Q9UPY5 501 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 CDX1P47902 265 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-201ENST00000261366 CSNK1A1P48729 337 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 CLDN17P56750 224 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 RND3P61587 244 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 DLK1P80370 383 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 TMEM187Q14656 261 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 TMEM176BQ3YBM2 270 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-201ENST00000261366 COL13A1Q5TAT6 717 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-201ENST00000261366 CCDC54Q8NEL0 328 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 HPSE2Q8WWQ2 592 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 NTNG2Q96CW9 530 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 MUCL1Q96DR8 90 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 GINS3Q9BRX5 216 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 NAA60Q9H7X0 242 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 SLC2A9Q9NRM0 540 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 LRP4O75096 1905 aa13.88□□□□□ -0.19
LMNB1-201ENST00000261366 RBFOX3A6NFN3 312 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 ST8SIA3O43173 380 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 FABP4P15090 132 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 ATP6V0CP27449 155 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 TLE1Q04724 770 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 GAMTQ14353 236 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.87□□□□□ -0.19
LMNB1-201ENST00000261366 CHST5Q9GZS9 411 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF576Q9H609 170 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 TREM2Q9NZC2 230 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 MMP17Q9ULZ9 603 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 FER1L5A0AVI2 2057 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 SOD3P08294 240 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 IGFBP4P22692 258 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 RSU1Q15404 277 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 SURF2Q15527 256 aaPredicted RBP13.87□□□□□ -0.19
LMNB1-201ENST00000261366 PIGYQ3MUY2 71 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 KIAA0895LQ68EN5 471 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF610Q8N9Z0 462 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 C8orf33Q9H7E9 229 aaPredicted RBP13.87□□□□□ -0.19
LMNB1-201ENST00000261366 MOB1AQ9H8S9 216 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 FRYQ5TBA9 3013 aa13.87□□□□□ -0.19
LMNB1-201ENST00000261366 SHISA7A6NL88 538 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 TRAF3IP2O43734 574 aaPredicted RBP13.86□□□□□ -0.19
LMNB1-201ENST00000261366 SSSCA1O60232 199 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 PMELP40967 661 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 EWSR1Q01844 656 aaKnown RBP eCLIP13.86□□□□□ -0.194e-8■■■□□ 17.2
LMNB1-201ENST00000261366 ABCA7Q8IZY2 2146 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 SLC35G3Q8N808 338 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 ST8SIA1Q92185 356 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 INTS12Q96CB8 462 aaKnown RBP13.86□□□□□ -0.19
LMNB1-201ENST00000261366 SDHAF3Q9NRP4 125 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 NOSIPQ9Y314 301 aaKnown RBP13.86□□□□□ -0.19
LMNB1-201ENST00000261366 ADAMTS9Q9P2N4 1935 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BKO60814 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BJP06899 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BOP23527 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BBP33778 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BDP58876 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BCP62807 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 GNMTQ14749 295 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms