RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RANP62826 216 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 MAPK14Q16539 360 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 SMIM21Q3B7S5 101 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CT45A1Q5HYN5 189 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 GPRC6AQ5T6X5 926 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ASCL5Q7RTU5 278 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR10K1Q8NGX5 313 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 OR10X1Q8NGY0 326 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CT45A3Q8NHU0 189 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 RNASEH2CQ8TDP1 164 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ZHX1-C8orf76Q96EF9 292 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CYYR1Q96J86 154 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 VAT1Q99536 393 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 SDHCQ99643 169 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ARHGDIGQ99819 225 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 APOL4Q9BPW4 351 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 KCTD14Q9BQ13 255 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 VPS25Q9BRG1 176 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM208Q9BTX3 173 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 BEX2Q9BXY8 128 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 NXF2Q9GZY0 626 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CHRNA10Q9GZZ6 450 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 TLNRD1Q9H1K6 362 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 DHX35Q9H5Z1 703 aaKnown RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CLMPQ9H6B4 373 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 BEX1Q9HBH7 125 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.02□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF391Q9UJN7 358 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 PYCARDQ9ULZ3 195 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 MTCH2Q9Y6C9 303 aa3.02□□□□□ -1.93
CCDC54-201ENST00000261058 MROH7Q68CQ1 1323 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF609O15014 1411 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 CEP152O94986 1710 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 ARAP1Q96P48 1450 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 RAPGEF2Q9Y4G8 1499 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 TRAV8-7A0A075B6U6 113 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 USP27XA6NNY8 438 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 LEUTXA8MZ59 168 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 HACD1B0YJ81 288 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 TMX2-CTNND1H3BSU7 103 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 GFYI3L273 518 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 K7EN84 100 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 AZIN1O14977 448 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 UBDO15205 165 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 CRXO43186 299 aaPredicted RBP3.01□□□□□ -1.93
CCDC54-201ENST00000261058 FGF16O43320 207 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 CHST10O43529 356 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 OR2B3O76000 313 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 SLC22A5O76082 557 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 LSM8O95777 96 aaKnown RBP3.01□□□□□ -1.93
CCDC54-201ENST00000261058 PDYNP01213 254 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 IGHV2-5P01817 119 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 AKR1C4P17516 323 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 CELP19835 753 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 S100A11P31949 105 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 PMELP40967 661 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 RAB7AP51149 207 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 WNT4P56705 351 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 KLF3P57682 345 aaPredicted RBP3.01□□□□□ -1.93
CCDC54-201ENST00000261058 PKIAP61925 76 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 HMGCS1Q01581 520 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 EMX2Q04743 252 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 PRPSAP1Q14558 356 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 C16orf72Q14CZ0 275 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 ZNF630Q2M218 657 aaPredicted RBP3.01□□□□□ -1.93
CCDC54-201ENST00000261058 VAX1Q5SQQ9 334 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 SYT6Q5T7P8 510 aaPredicted RBP3.01□□□□□ -1.93
CCDC54-201ENST00000261058 CPTPQ5TA50 214 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 SAXO2Q658L1 398 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM42Q69YG0 159 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 C11orf71Q6IPW1 123 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 PLET1Q6UQ28 207 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 WDR82Q6UXN9 313 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 TCF24Q7RTU0 167 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 SLC36A1Q7Z2H8 476 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 LRRC28Q86X40 367 aaPredicted RBP3.01□□□□□ -1.93
CCDC54-201ENST00000261058 RAB43Q86YS6 212 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 ARRDC1Q8N5I2 433 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM252Q8N6L7 170 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 ATP6V1C2Q8NEY4 427 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 OR4K2Q8NGD2 314 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 OR9Q1Q8NGQ5 310 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 OR6K3Q8NGY3 331 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 SFT2D1Q8WV19 159 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 ASB17Q8WXJ9 295 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 RGP1Q92546 391 aaPredicted RBP3.01□□□□□ -1.93
CCDC54-201ENST00000261058 TLCD1Q96CP7 247 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 MED8Q96G25 268 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 SEC22AQ96IW7 307 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 SLC35E1Q96K37 410 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 PGLYRP4Q96LB8 373 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 AGMATQ9BSE5 352 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 TMEM59Q9BXS4 323 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 MROQ9BYG7 248 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 MIXL1Q9H2W2 232 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 MFSD1Q9H3U5 465 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 ACP6Q9NPH0 428 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 AGPAT4Q9NRZ5 378 aa3.01□□□□□ -1.93
CCDC54-201ENST00000261058 GNG8Q9UK08 70 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms