RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SFRP4Q6FHJ7 346 aaPredicted RBP13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 Q8IYB0 196 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 C1orf87Q8N0U7 546 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 OR5H6Q8NGV6 325 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 LGALS14Q8TCE9 139 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 EMG1Q92979 244 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 MBD6Q96DN6 1003 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 BANF2Q9H503 90 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 CHODLQ9H9P2 273 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 BARX1Q9HBU1 254 aaPredicted RBP13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 NPTNQ9Y639 398 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 TMEM272A0A1B0GTI8 110 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 TMEM14DPA8MWL7 114 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 TMEM127O75204 238 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 ZNF780AO75290 641 aaPredicted RBP13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 CSTBP04080 98 aaKnown RBP13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 FGF12P61328 243 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 CARTPTQ16568 116 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 ELP2Q6IA86 826 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 Q6ZNX1 250 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 FAM58AQ8N1B3 248 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 KCTD12Q96CX2 325 aaKnown RBP13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 CST11Q9H112 138 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 HMG20AQ9NP66 347 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 RHBDL2Q9NX52 303 aa13.26□□□□□ -0.29
CCDC90B-201ENST00000260054 IGHV3OR15-7A0A075B7D8 119 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 CLDN25C9JDP6 229 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 CRTAPO75718 401 aaPredicted RBP13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 MPIG6BO95866 241 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 MGMTP16455 207 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 PRKACAP17612 351 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 SNU13P55769 128 aaKnown RBP13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 GPR176Q14439 515 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 CDH24Q86UP0 819 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 OSR2Q8N2R0 312 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 RHOFQ9HBH0 211 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 MYOZ1Q9NP98 299 aaPredicted RBP13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 RASL12Q9NYN1 266 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 ABRACLQ9P1F3 81 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 FBLN5Q9UBX5 448 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 PDZD2O15018 2839 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 FLNBO75369 2602 aaKnown RBP13.25□□□□□ -0.29
CCDC90B-201ENST00000260054 PPIAL4EA0A075B759 164 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 PPIAL4DF5H284 164 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 PPIAL4FP0DN26 164 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 GTF2F2P13984 249 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 EFNB2P52799 333 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 CAPZA1P52907 286 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 SCAND1P57086 179 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 TMEM33P57088 247 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 ZMYND11Q15326 602 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 PIGYQ3MUY2 71 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 TEX36Q5VZQ5 186 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 METAP1DQ6UB28 335 aaPredicted RBP13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 OR2W3Q7Z3T1 314 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 FAM90A1Q86YD7 464 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 LRRC75A-AS1Q8N1F1 130 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 DEFB108BQ8NET1 73 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 OR5T2Q8NGG2 359 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 KCNG3Q8TAE7 436 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 MRI1Q9BV20 369 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 NLKQ9UBE8 527 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 DNAJB11Q9UBS4 358 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 SPATA2Q9UM82 520 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 WIPI2Q9Y4P8 454 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 hCG_2014768A0A024R1R8 64 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 OOEPA6NGQ2 149 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 LGALS8O00214 317 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 PPIHO43447 177 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 TFF1P04155 84 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 DUSP1P28562 367 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 BTG1P62324 171 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 SMIM21Q3B7S5 101 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 AVPI1Q5T686 147 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 BIVMQ86UB2 503 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 OR51T1Q8NGJ9 327 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 ACOT12Q8WYK0 555 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 AP3S1Q92572 193 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 GAL3ST1Q99999 423 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 TMEM59Q9BXS4 323 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 SELENOIQ9C0D9 397 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 PCDHB16Q9NRJ7 776 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
CCDC90B-201ENST00000260054 OR2AT4A6NND4 320 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 IGHV2-70P01814 119 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 MUC1P15941 1255 aaPredicted RBP13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 PDLIM4P50479 330 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 BMXP51813 675 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 RBM11P57052 281 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 RPS27AP62979 156 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 PDCD1Q15116 288 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 MICBQ29980 383 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 ZNF404Q494X3 552 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 NHLRC3Q5JS37 347 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 DNM1P46Q6ZS02 220 aa13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 PEG10Q86TG7 708 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-201ENST00000260054 BORCS5Q969J3 196 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms