RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TNRC6AQ8NDV7 1962 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 A0A1W2PQM1 296 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 A0A1W2PRX2 142 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 MANSC4A6NHS7 340 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 CTDSPLO15194 276 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 TMEM50AO95807 157 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ADH4P08319 380 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 PRTN3P24158 256 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 GDF5P43026 501 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 TSFMP43897 325 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 POLR2JP52435 117 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ZXDBP98169 803 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 OLFML2AQ68BL7 652 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 DPPA3Q6W0C5 159 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SHISA5Q8N114 240 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 OR5B3Q8NH48 314 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SCAMP5Q8TAC9 235 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SKA2Q8WVK7 121 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 LHX4Q969G2 390 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ST6GALNAC5Q9BVH7 336 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 MBNL3Q9NUK0 354 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 TRAV8-6A0A0B4J262 113 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 TRAV38-1A0A0B4J264 116 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 UNGP13051 313 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 CD99P14209 185 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 USF1P22415 310 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 ZFP36L2P47974 494 aaKnown RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 NPBWR2P48146 333 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 RND2P52198 227 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 FOXL1Q12952 345 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 SUSD4Q5VX71 490 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 MBNL2Q5VZF2 373 aaKnown RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 SLC23A3Q6PIS1 610 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 PRSS45Q7RTY3 260 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 SYS1Q8N2H4 156 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 KLHDC1Q8N7A1 406 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 KREMEN2Q8NCW0 462 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 OR8G5Q8NG78 346 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 OR10S1Q8NGN2 331 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 OR4L1Q8NH43 312 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 MS4A6EQ96DS6 147 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 IMMP2LQ96T52 175 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 SNRNP25Q9BV90 132 aaKnown RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 MFSD1Q9H3U5 465 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 AKIRIN1Q9H9L7 192 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 TRMT112Q9UI30 125 aaKnown RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 WSB1Q9Y6I7 421 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 SBF1O95248 1867 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 TNFRSF11BO00300 401 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 NRG2O14511 850 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 PRICKLE3O43900 615 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF354AO60765 605 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 APOC2P02655 101 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 HLA-DPB1P04440 258 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 PSG2P11465 335 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 HGFP14210 728 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 GNG4P50150 75 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 TAS2R50P59544 299 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 ARG2P78540 354 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 CDK3Q00526 305 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 TIMM23BQ5SRD1 257 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 TXNRD3NBQ6F5E7 133 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 AMIGO3Q86WK7 504 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 NR2C2APQ86WQ0 139 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 PHYKPLQ8IUZ5 450 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF101Q8IZC7 436 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 OR4A5Q8NH83 315 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 PROKR1Q8TCW9 393 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 PPP1R1CQ8WVI7 109 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 NRTNQ99748 197 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 SRSF8Q9BRL6 282 aaKnown RBP6.78□□□□□ -1.32
GPNMB-201ENST00000258733 TRPM7Q96QT4 1865 aa6.78□□□□□ -1.32
GPNMB-201ENST00000258733 MAP1LC3B2A6NCE7 125 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 KIR2DS3K7RE56 304 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 BNIP3LO60238 219 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 SMIM10L2AP0DMW4 78 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 SMIM10L2BP0DMW5 78 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 GUCA1AP43080 201 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 P2RX1P51575 399 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 WNT3AP56704 352 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 KIR2DS3Q14952 304 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 OR8B8Q15620 311 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 CCL15Q16663 113 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 DCAF8Q5TAQ9 597 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF474Q6S9Z5 364 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 DEFB125Q8N687 156 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 OR4K17Q8NGC6 315 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM170AQ8WVE7 144 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 OR5B12Q96R08 314 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 PECRQ9BY49 303 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 MAP1LC3BQ9GZQ8 125 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 ANKRD10Q9NXR5 420 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 YIPF1Q9Y548 306 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 GBF1Q92538 1859 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 TSC2P49815 1807 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 DCDC2BA2VCK2 349 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 J3QR89 54 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 PLPP2O43688 288 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 CD33P20138 364 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 SLC6A9P48067 706 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms