RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 NPIPA3F8WFD2 350 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 IL2RAP01589 272 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 HNRNPA1P09651 372 aaKnown RBP eCLIP10.87□□□□□ -0.67
USP30-201ENST00000257548 MMP16P51512 607 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 ARL6IP1Q15041 203 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 TMEM41BQ5BJD5 291 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 ALKBH2Q6NS38 261 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 OR8B12Q8NGG6 310 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 SCARF2Q96GP6 870 aaPredicted RBP10.87□□□□□ -0.67
USP30-201ENST00000257548 SPIN2AQ99865 258 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 SPIN2BQ9BPZ2 258 aa10.87□□□□□ -0.67
USP30-201ENST00000257548 COL4A4P53420 1690 aaPredicted RBP10.87□□□□□ -0.67
USP30-201ENST00000257548 A0A1W2PNV4 684 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 DHRS7CA6NNS2 312 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BKO60814 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 CD5P06127 495 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BJP06899 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 SOD3P08294 240 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 CXCL1P09341 107 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 FBLP22087 321 aaKnown RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BOP23527 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BBP33778 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BDP58876 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BCP62807 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 DCDP81605 110 aaKnown RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 TMEM267Q0VDI3 215 aaPredicted RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 ZNF154Q13106 437 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 MFAP5Q13361 173 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 CEBPEQ15744 281 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST2H2BEQ16778 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 TIPARPQ7Z3E1 657 aaKnown RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 C1QL2Q7Z5L3 287 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BHQ93079 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 KLHDC7BQ96G42 594 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 MARS2Q96GW9 593 aaKnown RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BNQ99877 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 HIST1H2BMQ99879 126 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 ZNF286AQ9HBT8 521 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 POMT1Q9Y6A1 747 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 IGKV1D-43A0A0B4J1Z2 117 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 PTBP3O95758 552 aaKnown RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 EFEMP2O95967 443 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 GPR3P46089 330 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 MALLQ13021 153 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 REC114Q7Z4M0 266 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 DMRTC2Q8IXT2 367 aaPredicted RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 PAQR4Q8N4S7 273 aaPredicted RBP10.86□□□□□ -0.67
USP30-201ENST00000257548 POC1AQ8NBT0 407 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 CACNA1EQ15878 2313 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 DMDP11532 3685 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 FRMPD3Q5JV73 1810 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 TRAV34A0A0B4J273 112 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 PMS2P1A4D2B8 440 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 TGFBR3LH3BV60 316 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 PLPP3O14495 311 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 DEDDO75618 318 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 TK1P04183 234 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 LHX4Q969G2 390 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 ELOVL1Q9BW60 279 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 METTL9Q9H1A3 318 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 CALHM2Q9HA72 323 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 CUTCQ9NTM9 273 aa10.86□□□□□ -0.67
USP30-201ENST00000257548 DOCK11Q5JSL3 2073 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 K7EQS6 105 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 ZNF217O75362 1048 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 PGA3P0DJD8 388 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 HIST1H1BP16401 226 aaKnown RBP10.85□□□□□ -0.67
USP30-201ENST00000257548 CTHP32929 405 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 GABRA4P48169 554 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 TMEM50BP56557 158 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 CARD18P57730 90 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 FAM3AP98173 230 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 ISXQ2M1V0 245 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 SPANXN5Q5MJ07 72 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 FBXL14Q8N1E6 418 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 TMEM156Q8N614 296 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 OR10AD1Q8NGE0 317 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 SPPL3Q8TCT6 385 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 TMEM100Q9NV29 134 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 FUT9Q9Y231 359 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 ZNF407Q9C0G0 2248 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 NKX2-6A6NCS4 301 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 ADAM20O43506 726 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 IFNA1P01562 189 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 HBE1P02100 147 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 CHRNA7P36544 502 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 HTR5AP47898 357 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 DYNLT3P51808 116 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 HSD17B7P56937 341 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 EWSR1Q01844 656 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP30-201ENST00000257548 CLN3Q13286 438 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 TMEM196Q5HYL7 178 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 UNQ6494/PRO21346Q6UXR6 183 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 RTBDNQ9BSG5 229 aaPredicted RBP10.85□□□□□ -0.67
USP30-201ENST00000257548 RTN4RQ9BZR6 473 aa10.85□□□□□ -0.67
USP30-201ENST00000257548 HEATR1Q9H583 2144 aaKnown RBP10.85□□□□□ -0.67
USP30-201ENST00000257548 TRAPPC6AO75865 159 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms