RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TUSC1Q2TAM9 212 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 RNLSQ5VYX0 342 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 RBMS3Q6XE24 437 aaKnown RBP20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 ZNF485Q8NCK3 441 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 ZFAND2BQ8WV99 257 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 MYDGFQ969H8 173 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 ANKRD60Q9BZ19 345 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 ZNF69Q9UC07 566 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 ERGIC3Q9Y282 383 aa20.1■□□□□ 0.81
SDF2L1-201ENST00000248958 MXRA5Q9NR99 2828 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 MAGEB3O15480 346 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 TFF1P04155 84 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 CHRM2P08172 466 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 HCKP08631 526 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 IGHV4-38-2P0DP08 117 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 RAB3AP20336 220 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 MYF6P23409 242 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 C21orf33P30042 268 aaPredicted RBP20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 CAPZA1P52907 286 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 WNT4P56705 351 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 ARF6P62330 175 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 DMKNQ6E0U4 476 aaPredicted RBP20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 OR14J1Q9UGF5 321 aa20.09■□□□□ 0.81
SDF2L1-201ENST00000248958 ATP6V1G2O95670 118 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 LALBAP00709 142 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 CDK1P06493 297 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 KRTAP24-1Q3LI83 254 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 YIF1BQ5BJH7 314 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 SAXO1Q8IYX7 474 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 BATF2Q8N1L9 274 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 NANOGP1Q8N7R0 232 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 ZSCAN4Q8NAM6 433 aaPredicted RBP20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 C22orf15Q8WYQ4 148 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 RGP1Q92546 391 aaPredicted RBP20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 EMG1Q92979 244 aaKnown RBP20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 TBX15Q96SF7 602 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 ONECUT1Q9UBC0 465 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 GLS2Q9UI32 602 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 TPRKBQ9Y3C4 175 aa20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 SIRT4Q9Y6E7 314 aaPredicted RBP20.08■□□□□ 0.81
SDF2L1-201ENST00000248958 VENTXO95231 258 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 CD1AP06126 327 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 SFTPBP07988 381 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 SOX2P48431 317 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 ZNF529Q6P280 563 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 IZUMO2Q6UXV1 221 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 C1orf122Q6ZSJ8 110 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 FAM58AQ8N1B3 248 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 TBC1D15Q8TC07 691 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 GHSRQ92847 366 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 TMEM106AQ96A25 262 aa20.07■□□□□ 0.8
SDF2L1-201ENST00000248958 FBN3Q75N90 2809 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 A0A1W2PPH5 198 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 A0A1W2PQ09 198 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 TRIM77I1YAP6 450 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 M0R1W7 72 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 SPRY1O43609 319 aaPredicted RBP20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 BDH1Q02338 343 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 BLMHQ13867 455 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 KISS1Q15726 138 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 SPIN3Q5JUX0 258 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 SPATA3Q8NHX4 192 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 MND1Q9BWT6 205 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 PCDHGB5Q9Y5G0 923 aa20.06■□□□□ 0.8
SDF2L1-201ENST00000248958 IGHV3OR16-10A0A075B7F0 116 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 PTGES3LE9PB15 166 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 F8VVB4 439 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 F8VWA3 439 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 K7N7A8 449 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 KDM4BO94953 1096 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 INMTO95050 263 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 TK1P04183 234 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 ALDOBP05062 364 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 BCL3P20749 454 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 CEBPDP49716 269 aaPredicted RBP20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 Q499Y3 187 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 METAP1DQ6UB28 335 aaPredicted RBP20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 OR5D13Q8NGL4 314 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 RFT1Q96AA3 541 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 PGLYRP3Q96LB9 341 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 SPACA5Q96QH8 159 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 CDCA4Q9BXL8 241 aa20.05■□□□□ 0.8
SDF2L1-201ENST00000248958 TRBV5-5A0A0J9YX44 114 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 CENPVL3A0A0U1RRI6 287 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 NPBWR2P48146 333 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 PPP3R1P63098 170 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 SRSF2Q01130 221 aaKnown RBP20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 COL10A1Q03692 680 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 ACSM1Q08AH1 577 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 ZNF146Q15072 292 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 VMO1Q7Z5L0 202 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 BCL6BQ8N143 479 aaPredicted RBP20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 SIGLECL1Q8N7X8 197 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 THRSPQ92748 146 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 SNX22Q96L94 193 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 ZMAT3Q9HA38 289 aaKnown RBP20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 ELL3Q9HB65 397 aaPredicted RBP20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 RBFOX1Q9NWB1 397 aaKnown RBP20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 TAS2R4Q9NYW5 299 aa20.04■□□□□ 0.8
SDF2L1-201ENST00000248958 RAB26Q9ULW5 256 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms