RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 WDR38Q5JTN6 314 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 PRSS45Q7RTY3 260 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 MRPL21Q7Z2W9 205 aaKnown RBP11.31□□□□□ -0.6
DDX39A-201ENST00000242776 FAM90A1Q86YD7 464 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 ELMOD2Q8IZ81 293 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 ZNF676Q8N7Q3 588 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 OR5AK2Q8NH90 309 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 SMIM19Q96E16 107 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 E9PI62 339 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 GPR37O15354 613 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 OGG1O15527 345 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 LALBAP00709 142 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 CD1AP06126 327 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 VSIG10L2P0DP72 767 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 CELP19835 753 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 GTF2A1P52655 376 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-201ENST00000242776 GPR50Q13585 617 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 GFOD2Q3B7J2 385 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 VAX1Q5SQQ9 334 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 ZBTB37Q5TC79 503 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 TMEM244Q5VVB8 128 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 XAF1Q6GPH4 301 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 C11orf87Q6NUJ2 197 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 PGAP1Q75T13 922 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 PRSS35Q8N3Z0 413 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 CELF2-AS1Q8N7Q2 184 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 CCDC54Q8NEL0 328 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 PPP1R35Q8TAP8 253 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 RPS4Y2Q8TD47 263 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 ITFG2Q969R8 447 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 MUL1Q969V5 352 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 ERGIC1Q969X5 290 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 CCL13Q99616 98 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
DDX39A-201ENST00000242776 RPUSD1Q9UJJ7 312 aaKnown RBP11.3□□□□□ -0.6
DDX39A-201ENST00000242776 PNMA8CA0A1B0GUJ8 204 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 A0A1B0GVI7 797 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 RNASEK-C17orf49H0YIS7 233 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 NPFFO15130 113 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 TTRP02766 147 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 JUNBP17275 347 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-201ENST00000242776 PAX6P26367 422 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 KIR3DL2P43630 455 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 NANOS3P60323 173 aaKnown RBP11.29□□□□□ -0.6
DDX39A-201ENST00000242776 GMFBP60983 142 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 TRAM1Q15629 374 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 GLYATL3Q5SZD4 288 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 DMKNQ6E0U4 476 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-201ENST00000242776 ZFP41Q8N8Y5 198 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 OR2AE1Q8NHA4 323 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 REEP6Q96HR9 211 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 OPALINQ96PE5 141 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 SLC22A13Q9Y226 551 aa11.29□□□□□ -0.6
DDX39A-201ENST00000242776 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 GGT3PA6NGU5 568 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 OR4C45A6NMZ5 311 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 H3BUX3 64 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 CCRL2O00421 344 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 MTRF1O75570 445 aaKnown RBP11.28□□□□□ -0.6
DDX39A-201ENST00000242776 INMTO95050 263 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 MPIG6BO95866 241 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 ISG15P05161 165 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 CPEP16870 476 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 ANOS1P23352 680 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 IKZF1Q13422 519 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 TPBGQ13641 420 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 ODF4Q2M2E3 257 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-201ENST00000242776 LIPKQ5VXJ0 399 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 GCSAMQ8N6F7 178 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 FAM216BQ8N7L0 139 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 OR51E1Q8TCB6 317 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
DDX39A-201ENST00000242776 THRSPQ92748 146 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 PPP1R14AQ96A00 147 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-201ENST00000242776 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 SEH1LQ96EE3 360 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 NECAP2Q9NVZ3 263 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 FBLN5Q9UBX5 448 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 HHLA2Q9UM44 414 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 KPTNQ9Y664 436 aa11.28□□□□□ -0.6
DDX39A-201ENST00000242776 LOC107986453A0A1B0GWG9 222 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 CD300LBA8K4G0 201 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 SYT7O43581 403 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 DHRS3O75911 302 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 ZFPL1O95159 310 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 PSMA1P25786 263 aaKnown RBP11.27□□□□□ -0.6
DDX39A-201ENST00000242776 SAA4P35542 130 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 YIF1BQ5BJH7 314 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 MS4A15Q8N5U1 240 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 TSEN15Q8WW01 171 aaKnown RBP11.27□□□□□ -0.6
DDX39A-201ENST00000242776 C17orf50Q8WW18 174 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 PHF21AQ96BD5 680 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 PGLYRP3Q96LB9 341 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 PDCD1LG2Q9BQ51 273 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 MMP28Q9H239 520 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms