RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CLPXO76031 633 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 LY6HO94772 140 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 HTR3BO95264 441 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 CYB5R3P00387 301 aaPredicted RBP11.79□□□□□ -0.52
SEC61B-201ENST00000223641 IGHV4-39P01824 125 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 IRF2P14316 349 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 DAOP14920 347 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 MGMTP16455 207 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 GLRA1P23415 457 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 RPS27AP62979 156 aaKnown RBP11.79□□□□□ -0.52
SEC61B-201ENST00000223641 HOXA4Q00056 320 aaPredicted RBP11.79□□□□□ -0.52
SEC61B-201ENST00000223641 ZNF146Q15072 292 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 HFEQ30201 348 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 C1orf87Q8N0U7 546 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 CCL17Q92583 94 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 Q96M66 194 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 ELL3Q9HB65 397 aaPredicted RBP11.79□□□□□ -0.52
SEC61B-201ENST00000223641 EDARQ9UNE0 448 aa11.79□□□□□ -0.52
SEC61B-201ENST00000223641 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
SEC61B-201ENST00000223641 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 LYNX1G3V0Z9 82 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 HPGDSO60760 199 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 CRTAPO75718 401 aaPredicted RBP11.78□□□□□ -0.52
SEC61B-201ENST00000223641 NXPH2O95156 264 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 MPIG6BO95866 241 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 APOA1P02647 267 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 LYNX1P0DP58 116 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 ART1P52961 327 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 RBM11P57052 281 aaKnown RBP11.78□□□□□ -0.52
SEC61B-201ENST00000223641 IL13RA2Q14627 380 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 FAM189A2Q15884 450 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 SPIN3Q5JUX0 258 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 UBE2NLQ5JXB2 153 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 LRRC28Q86X40 367 aaPredicted RBP11.78□□□□□ -0.52
SEC61B-201ENST00000223641 CMTM4Q8IZR5 234 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 BATF2Q8N1L9 274 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 SAMD12Q8N8I0 201 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 RAB40AQ8WXH6 277 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 EMG1Q92979 244 aaKnown RBP11.78□□□□□ -0.52
SEC61B-201ENST00000223641 FAM46BQ96A09 425 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 WDFY2Q96P53 400 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 TMEM59Q9BXS4 323 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 BANF2Q9H503 90 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 MYOZ1Q9NP98 299 aaPredicted RBP11.78□□□□□ -0.52
SEC61B-201ENST00000223641 RHBDL2Q9NX52 303 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 IL36RNQ9UBH0 155 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 ST3GAL6Q9Y274 331 aa11.78□□□□□ -0.52
SEC61B-201ENST00000223641 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.52
SEC61B-201ENST00000223641 SPG11Q96JI7 2443 aa11.77□□□□□ -0.52
SEC61B-201ENST00000223641 A0A0A6YYD4 124 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A10PA6NDY2 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A18PA6NE21 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A16PA6NEW6 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A20PA6NIJ5 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A8PA6NJQ4 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A7PA6NKC0 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A22PA8MWA6 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A12PA8MX19 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A5PA8MXJ8 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A23PA8MXZ1 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 RAB27BO00194 218 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 TNFRSF13BO14836 293 aaPredicted RBP11.77□□□□□ -0.53
SEC61B-201ENST00000223641 KNG1P01042 644 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 EIF4EP06730 217 aaKnown RBP11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A15PP0C7V4 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A13PP0C7W8 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A14PP0C7W9 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM90A24PP0C7X0 464 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 MUC1P15941 1255 aaPredicted RBP11.77□□□□□ -0.53
SEC61B-201ENST00000223641 PRKACAP17612 351 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 PTH2RP49190 550 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 TMEM33P57088 247 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 MPV17LQ2QL34 196 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 SMIM21Q3B7S5 101 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 LAX1Q8IWV1 398 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 OR6Q1Q8NGQ2 317 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 NINJ1Q92982 152 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 MBD6Q96DN6 1003 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 SEH1LQ96EE3 360 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 NUDT16L1Q9BRJ7 211 aaKnown RBP11.77□□□□□ -0.53
SEC61B-201ENST00000223641 URM1Q9BTM9 101 aaKnown RBP11.77□□□□□ -0.53
SEC61B-201ENST00000223641 SELENOIQ9C0D9 397 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 C6orf62Q9GZU0 229 aaPredicted RBP11.77□□□□□ -0.53
SEC61B-201ENST00000223641 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
SEC61B-201ENST00000223641 PLEKHA6Q9Y2H5 1048 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 PEX16Q9Y5Y5 336 aa11.77□□□□□ -0.53
SEC61B-201ENST00000223641 PPIAL4EA0A075B759 164 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 A0A0A6YYH2 397 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 METTL21EPA6NDL7 271 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 A6NJ64 397 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 PPIAL4DF5H284 164 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 LGALS8O00214 317 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms