RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TEX29Q8N6K0 151 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 TMEM185AQ8NFB2 350 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 OR51A2Q8NGJ7 313 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 OR5D14Q8NGL3 314 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 MYDGFQ969H8 173 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 SDSLQ96GA7 329 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 PGLYRP3Q96LB9 341 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 NKX3-1Q99801 234 aaPredicted RBP10.48□□□□□ -0.73
LSM5-201ENST00000223084 PCGF1Q9BSM1 259 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 RBFOX1Q9NWB1 397 aaKnown RBP10.48□□□□□ -0.73
LSM5-201ENST00000223084 IL36RNQ9UBH0 155 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 ZNF69Q9UC07 566 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 ERGIC3Q9Y282 383 aa10.48□□□□□ -0.73
LSM5-201ENST00000223084 SOX21Q9Y651 276 aaPredicted RBP10.48□□□□□ -0.73
LSM5-201ENST00000223084 IGKV1-12A0A0C4DH73 117 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 ZNF879B4DU55 563 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 SULT1B1O43704 296 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 ECDO95905 644 aaPredicted RBP10.47□□□□□ -0.73
LSM5-201ENST00000223084 KNG1P01042 644 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 IGKV1D-12P01611 117 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 PPIAL4GP0DN37 164 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 CAPZA1P52907 286 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 SNU13P55769 128 aaKnown RBP10.47□□□□□ -0.73
LSM5-201ENST00000223084 RPS11P62280 158 aaKnown RBP eCLIP10.47□□□□□ -0.73
LSM5-201ENST00000223084 ARF6P62330 175 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 SLC35A2P78381 396 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 PDZK1IP1Q13113 114 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 MKXQ8IYA7 352 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 BCL6BQ8N143 479 aaPredicted RBP10.47□□□□□ -0.73
LSM5-201ENST00000223084 PNLDC1Q8NA58 520 aaKnown RBP10.47□□□□□ -0.73
LSM5-201ENST00000223084 LY6G5BQ8NDX9 201 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 UPRTQ96BW1 309 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 OR5M11Q96RB7 305 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 MDFIQ99750 246 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 SLC6A7Q99884 636 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 NUP50Q9UKX7 468 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 TPRKBQ9Y3C4 175 aa10.47□□□□□ -0.73
LSM5-201ENST00000223084 FBN1P35555 2871 aaKnown RBP10.47□□□□□ -0.73
LSM5-201ENST00000223084 TRAV40A0A0B4J280 105 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 TRBV5-5A0A0J9YX44 114 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 TOX4O94842 621 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 ALX3O95076 343 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 CD2P06729 351 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 LIPFP07098 398 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 MMP9P14780 707 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 CELP19835 753 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 RAB3AP20336 220 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 CRHBPP24387 322 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 DUSP1P28562 367 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 CAV3P56539 151 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 TAS2R43P59537 309 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 ZP1P60852 638 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 PRB3Q04118 309 aaPredicted RBP10.46□□□□□ -0.73
LSM5-201ENST00000223084 IRF3Q14653 427 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 KISS1Q15726 138 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 RNLSQ5VYX0 342 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 ZNF529Q6P280 563 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 SATL1Q86VE3 508 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 EMG1Q92979 244 aaKnown RBP10.46□□□□□ -0.73
LSM5-201ENST00000223084 TMEM106AQ96A25 262 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 WDFY2Q96P53 400 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 TBX15Q96SF7 602 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 MND1Q9BWT6 205 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 CDCA4Q9BXL8 241 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 SIRPDQ9H106 197 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 DUSP21Q9H596 190 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 CNTD2Q9H8S5 307 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 NEK6Q9HC98 313 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 ONECUT1Q9UBC0 465 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 RAB26Q9ULW5 256 aa10.46□□□□□ -0.73
LSM5-201ENST00000223084 LSM2Q9Y333 95 aaKnown RBP10.46□□□□□ -0.73
LSM5-201ENST00000223084 NBEAL1Q6ZS30 2694 aa10.46□□□□□ -0.74
LSM5-201ENST00000223084 A0A1W2PPK0 400 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 RGS10O43665 173 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 TCF21O43680 179 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 VENTXO95231 258 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 CYB5AP00167 134 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 TMEM225BP0DP42 221 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 PRKACAP17612 351 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 DLX1P56177 255 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 COL10A1Q03692 680 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 C11orf91Q3C1V1 193 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 YIF1BQ5BJH7 314 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 METTL11BQ5VVY1 283 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 RUSC1-AS1Q66K80 236 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 FAM58AQ8N1B3 248 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 BPIFB2Q8N4F0 458 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 ZNF561Q8N587 486 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 OR4M1Q8NGD0 313 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 OR52N4Q8NGI2 321 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 C8orf46Q8TAG6 207 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 OR14A2Q96R54 314 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 CCDC90BQ9GZT6 254 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 C19orf12Q9NSK7 152 aa10.45□□□□□ -0.74
LSM5-201ENST00000223084 TRAV8-7A0A075B6U6 113 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 TRBV5-7A0A0A0MS05 114 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 A0A1W2PQ09 198 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 MAGEA13PA6NCF6 341 aa10.44□□□□□ -0.74
LSM5-201ENST00000223084 GABRPO00591 440 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms