RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 CTSDP07339 412 aaPredicted RBP13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 CST2P09228 141 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 PJVKQ0ZLH3 352 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF273Q14593 569 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 PEA15Q15121 130 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 DPPA2Q7Z7J5 298 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 TMEM217Q8N7C4 229 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 KCNJ16Q9NPI9 418 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 NSG2Q9Y328 171 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 ADAM10O14672 748 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 HSD17B6O14756 317 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 PDCD6O75340 191 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 ASCL1P50553 236 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 TMEM33P57088 247 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 PSG4Q00888 419 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 C10orf128Q5T292 105 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 C10orf35Q96D05 121 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 LYZL4Q96KX0 146 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 IMMP1LQ96LU5 166 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 PBDC1Q9BVG4 233 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 DNAJB11Q9UBS4 358 aa13.05□□□□□ -0.32
UBE2D4-201ENST00000222402 RCC1P18754 421 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 ATRAIDQ6UW56 229 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 EXTL1Q92935 676 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 REG4Q9BYZ8 158 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 CNTNAP3Q9BZ76 1288 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 MAGT1Q9H0U3 335 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 PLEKHA2Q9HB19 425 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 CACNA1DQ01668 2161 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 SERPINA7P05543 415 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 PRKACAP17612 351 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 PDZK1IP1Q13113 114 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 KCNMB1Q16558 191 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 NAA60Q9H7X0 242 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 FAM74A7A6NL05 159 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 A6NLC8 198 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 F12P00748 615 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 CST4P01036 141 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF17P17021 662 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 ACKR3P25106 362 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 PTGER4P35408 488 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 UBE2NP61088 152 aaKnown RBP13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 QRFPP83859 136 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF92Q03936 586 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 FAM74A3Q4VXF1 159 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 MMP26Q9NRE1 261 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 FBLN5Q9UBX5 448 aa13.04□□□□□ -0.32
UBE2D4-201ENST00000222402 TMEM131Q92545 1883 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 A0A0G2JMM0 328 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 LOC105371267A0A1B0GV96 52 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 A0A1W2PPB8 328 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 A0A1W2PRS3 328 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 KIR3DP1A8MWS1 328 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF732B4DXR9 585 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 TNFSF12O43508 249 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 RFPL3SP0C7P2 107 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 GPR35Q9HC97 309 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 AUP1Q9Y679 476 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 MED19A0JLT2 244 aaPredicted RBP13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 CYC1P08574 325 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 ARG2P78540 354 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 MRPL49Q13405 166 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 OR10Z1Q8NGY1 313 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 OR51H1Q8NH63 302 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF806P0C7X5 589 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 CALCRP30988 508 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 SSPNQ14714 243 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 OR2A2Q6IF42 318 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 LYZL2Q7Z4W2 148 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 GLRX5Q86SX6 157 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 CBLN2Q8IUK8 224 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 C1orf210Q8IVY1 113 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 TMEM54Q969K7 222 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 RRNAD1Q96FB5 475 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 ZC3H10Q96K80 434 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 C20orf24Q9BUV8 137 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 SUCNR1Q9BXA5 334 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 LPAR3Q9UBY5 353 aa13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 NCOA6Q14686 2063 aaPredicted RBP13.03□□□□□ -0.32
UBE2D4-201ENST00000222402 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 NUDT19A8MXV4 375 aa13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 F2RL1P55085 397 aa13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 RAB1AP62820 205 aa13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 ZNF385CQ66K41 422 aaPredicted RBP13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 ZDHHC23Q8IYP9 409 aa13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 NANOS1Q8WY41 292 aaKnown RBP13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 RTBDNQ9BSG5 229 aaPredicted RBP13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 CDH20Q9HBT6 801 aa13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 PNRC2Q9NPJ4 139 aaKnown RBP13.02□□□□□ -0.32
UBE2D4-201ENST00000222402 ABCD4O14678 606 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 AKR1C3P42330 323 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 RAB5BP61020 215 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 GUCA2BQ16661 112 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 AKR1C8PQ5T2L2 129 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 RPUSD3Q6P087 351 aaKnown RBP13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 TMEM182Q6ZP80 229 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms