RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 FAM3DQ96BQ1 224 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 PIMREGQ9BSJ6 248 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 BARHL1Q9BZE3 327 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 BPESC1Q9GZL8 116 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 IL36GQ9NZH8 169 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 NOTCH2Q04721 2471 aa22.85■■□□□ 1.25
CHMP4B-201ENST00000217402 ZNF701M0R085 212 aaPredicted RBP22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 LGALS8O00214 317 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 BPNT1O95861 308 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 UBBP0CG47 229 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 GIFP27352 417 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 CFPP27918 469 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 FAM90A1Q86YD7 464 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 NARFLQ9H6Q4 476 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 RASL12Q9NYN1 266 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 NLKQ9UBE8 527 aa22.84■■□□□ 1.25
CHMP4B-201ENST00000217402 IGHV4-30-2A0A087WSY4 118 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 CRTAPO75718 401 aaPredicted RBP22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 IGHV2-70P01814 119 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 VSIG8P0DPA2 414 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 DSCR9P59020 149 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 MICBQ29980 383 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 DNM1P46Q6ZS02 220 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 TMEM104Q8NE00 496 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 BANF2Q9H503 90 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 HMG20AQ9NP66 347 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 GHRLQ9UBU3 117 aa22.83■■□□□ 1.25
CHMP4B-201ENST00000217402 NDUFS8O00217 210 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 ZNF780AO75290 641 aaPredicted RBP22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 TFF1P04155 84 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 SNRPBP14678 240 aaKnown RBP22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 ART1P52961 327 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 GPR176Q14439 515 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 TEX36Q5VZQ5 186 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 CROCCP3Q8IVE0 287 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 DGCR14Q96DF8 476 aaKnown RBP22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 FOXC2Q99958 501 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 OR14J1Q9UGF5 321 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 TRAV38-1A0A0B4J264 116 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 A6NHS1 94 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 MDH2P40926 338 aaKnown RBP22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 RORCP51449 518 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 FGF12P61328 243 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 C2orf76Q3KRA6 126 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 PIGYQ3MUY2 71 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 ELP2Q6IA86 826 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 KRTAP1-3Q8IUG1 177 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 CST11Q9H112 138 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 ITGB1BP2Q9UKP3 347 aa22.82■■□□□ 1.24
CHMP4B-201ENST00000217402 CCDC168Q8NDH2 2452 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 OR2AT4A6NND4 320 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 MPIG6BO95866 241 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 PAHP00439 452 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 GYPAP02724 150 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 GTF2F2P13984 249 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 MUC1P15941 1255 aaPredicted RBP22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 MGMTP16455 207 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 DUSP1P28562 367 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 UNC119Q13432 240 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 FIP1L1Q6UN15 594 aaKnown RBP22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 OSR2Q8N2R0 312 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 DYNC2LI1Q8TCX1 351 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 DCUN1D5Q9BTE7 237 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 RHOFQ9HBH0 211 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 TMEM165Q9HC07 324 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 BATF3Q9NR55 127 aa22.81■■□□□ 1.24
CHMP4B-201ENST00000217402 CEBPDP49716 269 aaPredicted RBP22.8■■□□□ 1.24
CHMP4B-201ENST00000217402 QRFPP83859 136 aa22.8■■□□□ 1.24
CHMP4B-201ENST00000217402 ZNF404Q494X3 552 aa22.8■■□□□ 1.24
CHMP4B-201ENST00000217402 LGALS14Q8TCE9 139 aa22.8■■□□□ 1.24
CHMP4B-201ENST00000217402 TMEM246Q9BRR3 403 aa22.8■■□□□ 1.24
CHMP4B-201ENST00000217402 PCDHB16Q9NRJ7 776 aa22.8■■□□□ 1.24
CHMP4B-201ENST00000217402 OR5V1Q9UGF6 321 aa22.8■■□□□ 1.24
CHMP4B-201ENST00000217402 SETXQ7Z333 2677 aaKnown RBP22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 TMEM272A0A1B0GTI8 110 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 RFPL4AA6NLU0 287 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 RFPL4AL1F8VTS6 287 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 PSG2P11465 335 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 BMXP51813 675 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 PLA2G7Q13093 441 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 STUMQ69YW2 141 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 METAP1DQ6UB28 335 aaPredicted RBP22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 PRSS57Q6UWY2 283 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 LRRC28Q86X40 367 aaPredicted RBP22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 Q8NFD4 153 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 KCNG3Q8TAE7 436 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 GAL3ST1Q99999 423 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 SELENOIQ9C0D9 397 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 ST3GAL6Q9Y274 331 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 IGKV1D-17A0A075B6S4 117 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 TMEM14DPA8MWL7 114 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 KNG1P01042 644 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 SOX6P35712 828 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 NR4A2P43354 598 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 MUC20Q8N307 709 aaPredicted RBP22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 Q96MF0 132 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 TMEM59Q9BXS4 323 aa22.79■■□□□ 1.24
CHMP4B-201ENST00000217402 VWC2LB2RUY7 222 aa22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 ZNF182P17025 639 aaPredicted RBP22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 RANBP1P43487 201 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms