RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 C1orf100Q5SVJ3 147 aa16.89■□□□□ 0.3
RHBDD3-201ENST00000216085 GPR107Q5VW38 600 aa16.89■□□□□ 0.3
RHBDD3-201ENST00000216085 GLIPR1L1Q6UWM5 242 aa16.89■□□□□ 0.3
RHBDD3-201ENST00000216085 OR8B3Q8NGG8 313 aa16.89■□□□□ 0.3
RHBDD3-201ENST00000216085 OR8B2Q96RD0 313 aa16.89■□□□□ 0.3
RHBDD3-201ENST00000216085 NKX3-1Q99801 234 aaPredicted RBP16.89■□□□□ 0.3
RHBDD3-201ENST00000216085 CST11Q9H112 138 aa16.89■□□□□ 0.3
RHBDD3-201ENST00000216085 FLNAP21333 2647 aaKnown RBP16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 A6NHS1 94 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 H7C1Q1 480 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 SLC17A2O00624 439 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 CDRT1O95170 752 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 HTR3BO95264 441 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 GABRA2P47869 451 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 NPBWR2P48146 333 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 LSM3P62310 102 aaKnown RBP16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 HOXA4Q00056 320 aaPredicted RBP16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 SLC22A6Q4U2R8 563 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 STUMQ69YW2 141 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 ASCL4Q6XD76 172 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 OR4D6Q8NGJ1 314 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 ZNF665Q9H7R5 613 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 PATZ1Q9HBE1 687 aaKnown RBP16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 HMG20AQ9NP66 347 aa16.89■□□□□ 0.29
RHBDD3-201ENST00000216085 SLC22A1O15245 554 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 TMPRSS2O15393 492 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 ADAM20O43506 726 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 GABARAPO95166 117 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 IGHV2-5P01817 119 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 SERPINA2P20848 420 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 SDC2P34741 201 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 FGF12P61328 243 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 DGUOKQ16854 277 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 ELP2Q6IA86 826 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 LYPD6Q86Y78 171 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 NEIL1Q96FI4 390 aaPredicted RBP16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 OR14J1Q9UGF5 321 aa16.88■□□□□ 0.29
RHBDD3-201ENST00000216085 SFTPBP07988 381 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 GTF2F2P13984 249 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 MXD1Q05195 221 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 C1QL2Q7Z5L3 287 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 CLVS1Q8IUQ0 354 aaPredicted RBP16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 OR5T2Q8NGG2 359 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 ANGPTL6Q8NI99 470 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 SEH1LQ96EE3 360 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 MRPS24Q96EL2 167 aaKnown RBP16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 MED30Q96HR3 178 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 SHISA3A0PJX4 238 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 RFPL4AA6NLU0 287 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 NOTOA8MTQ0 251 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 RFPL4AL1F8VTS6 287 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 F8VVB4 439 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 F8VWA3 439 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 CD37P11049 281 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 PSG2P11465 335 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 ARSBP15848 533 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 IL13RA1P78552 427 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 ESCO2Q56NI9 601 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 ATPAF1Q5TC12 328 aaPredicted RBP16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 CROCCP3Q8IVE0 287 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 OSR2Q8N2R0 312 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 OR10K1Q8NGX5 313 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 RAB2BQ8WUD1 216 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 BCL7BQ9BQE9 202 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 RNF167Q9H6Y7 350 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 KAAG1Q9UBP8 84 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 STEAP1Q9UHE8 339 aa16.87■□□□□ 0.29
RHBDD3-201ENST00000216085 A0A096LNT2 108 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 DPPA5A6NC42 116 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 IFITM5A6NNB3 132 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 AIPO00170 330 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 BPNT1O95861 308 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 NPY4RP50391 375 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 OR10A3P58181 314 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 GFI1Q99684 422 aa16.86■□□□□ 0.29
RHBDD3-201ENST00000216085 SH2D1BO14796 132 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 SMAD7O15105 426 aaKnown RBP16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 IL1AP01583 271 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 CFPP27918 469 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 PRDX2P32119 198 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 PITPNBP48739 271 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 SNU13P55769 128 aaKnown RBP16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 ZNF146Q15072 292 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 LINC00596Q86U02 117 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 ZNF561Q8N587 486 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 Q8NFD4 153 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 COX4I2Q96KJ9 171 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 CCL13Q99616 98 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 CLN8Q9UBY8 286 aa16.85■□□□□ 0.29
RHBDD3-201ENST00000216085 IGKV1D-17A0A075B6S4 117 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 F5H0A9 414 aaPredicted RBP16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 NDUFB3O43676 98 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 TMEM127O75204 238 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 CRTAPO75718 401 aaPredicted RBP16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 HAND1O96004 215 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 CHRM2P08172 466 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 SERPINB10P48595 397 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 GZMKP49863 264 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 TMBIM6P55061 237 aa16.84■□□□□ 0.29
RHBDD3-201ENST00000216085 VBP1P61758 197 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms