RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 ELLP55199 621 aaPredicted RBP13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 SOX8P57073 446 aa13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 MRPS21P82921 87 aaKnown RBP13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 C1orf189Q5VU69 101 aa13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 CATSPERDQ86XM0 798 aa13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 RHBDD1Q8TEB9 315 aa13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 MRPL24Q96A35 216 aaKnown RBP13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 KTI12Q96EK9 354 aaPredicted RBP13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 ZNF700Q9H0M5 742 aa13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 CD207Q9UJ71 328 aa13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 B3GALT5Q9Y2C3 310 aa13.03□□□□□ -0.32
TMEM38A-201ENST00000187762 A0A1B0GU03 582 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 SCGNO76038 276 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 MBPP02686 304 aaPredicted RBP13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 OPN1MWP04001 364 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 OPN1MW2P0DN77 364 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 OPN1MW3P0DN78 364 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 CCKARP32238 428 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 GRK6P43250 576 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 ALDH3B1P43353 468 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 PDLIM4P50479 330 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 NOVA1P51513 510 aaKnown RBP13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 IGLV3-21P80748 117 aaPredicted RBP13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 FOXN4Q96NZ1 517 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 NICN1Q9BSH3 213 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 LRFN1Q9P244 771 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 GRHPRQ9UBQ7 328 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 GAB2Q9UQC2 676 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 HIF3AQ9Y2N7 669 aa13.02□□□□□ -0.32
TMEM38A-201ENST00000187762 XRCC2O43543 280 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 NSA2O95478 260 aaKnown RBP13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 IFNA21P01568 189 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 FUT7Q11130 342 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 ZNF74Q16587 644 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 GPR157Q5UAW9 335 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 ZFP62Q8NB50 900 aaPredicted RBP13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 EMG1Q92979 244 aaKnown RBP13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 HLA-CQ95604 372 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 LANCL2Q9NS86 450 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 FKBP11Q9NYL4 201 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 HHLA2Q9UM44 414 aa13.02□□□□□ -0.33
TMEM38A-201ENST00000187762 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 ETV2O00321 342 aaPredicted RBP13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 SDCBPO00560 298 aaPredicted RBP13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 BPNT1O95861 308 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 RENP00797 406 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 EGR4Q05215 589 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 TAF9Q16594 264 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 PRR22Q8IZ63 422 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 OR52N4Q8NGI2 321 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 OR2G3Q8NGZ4 309 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 CYYR1Q96J86 154 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 LRRC61Q9BV99 259 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 AK3Q9UIJ7 227 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 LOC107986453A0A1B0GWG9 222 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 AHSA1O95433 338 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 HPRT1P00492 218 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 HLA-DQA2P01906 255 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 CDKN1BP46527 198 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 GABREP78334 506 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 ATG4DQ86TL0 474 aaPredicted RBP13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 OR1N1Q8NGS0 311 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 HAS2Q92819 552 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 ACY3Q96HD9 319 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 TSPAN32Q96QS1 320 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 NUDT16L1Q9BRJ7 211 aaKnown RBP13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 PCNX3Q9H6A9 2034 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 KIF26BQ2KJY2 2108 aa13.01□□□□□ -0.33
TMEM38A-201ENST00000187762 C17orf105B2RV13 164 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 PPP5D1E7EU14 171 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 IFNL4K9M1U5 179 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 AMY2BP19961 511 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 EMP2P54851 167 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 SLC37A1P57057 533 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 WBP2NLQ6ICG8 309 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 Q6ZS52 159 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 COX15Q7KZN9 410 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
TMEM38A-201ENST00000187762 ANGPTL4Q9BY76 406 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 MMP25Q9NPA2 562 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 ZFP30Q9Y2G7 519 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 CDC14CA4D256 554 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 A8MVM7 634 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 LCATP04180 440 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 OR3A2P47893 321 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 BATFQ16520 125 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 FNDC7Q5VTL7 733 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 SP5Q6BEB4 398 aaPredicted RBP13□□□□□ -0.33
TMEM38A-201ENST00000187762 SLC18B1Q6NT16 456 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 MARCH3Q86UD3 253 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 C11orf42Q8N5U0 333 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 TSLPQ969D9 159 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 RTN4RQ9BZR6 473 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 OR2J1Q9GZK6 312 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 MMP17Q9ULZ9 603 aa13□□□□□ -0.33
TMEM38A-201ENST00000187762 C14orf166Q9Y224 244 aaKnown RBP13□□□□□ -0.33
TMEM38A-201ENST00000187762 A0A0A6YYD4 124 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms