RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 MPZP25189 248 aa13.25□□□□□ -0.29
PDZD4-201ENST00000164640 MLF1P58340 268 aa13.25□□□□□ -0.29
PDZD4-201ENST00000164640 HIKESHIQ53FT3 197 aa13.25□□□□□ -0.29
PDZD4-201ENST00000164640 ZNF664Q8N3J9 261 aa13.25□□□□□ -0.29
PDZD4-201ENST00000164640 CCNL2Q96S94 520 aaPredicted RBP13.25□□□□□ -0.29
PDZD4-201ENST00000164640 MSTNO14793 375 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 CNOT4O95628 575 aaKnown RBP13.24□□□□□ -0.29
PDZD4-201ENST00000164640 IFNA5P01569 189 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 CXCL10P02778 98 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 ISG15P05161 165 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 LYL1P12980 280 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 MMP16P51512 607 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDZD4-201ENST00000164640 OR8B12Q8NGG6 310 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 IGFLR1Q9H665 355 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 PITPNC1Q9UKF7 332 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 LOC390937A0A1W2PQ73 354 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 IL33O95760 270 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 GLIPR1P48060 266 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 RPS18P62269 152 aaKnown RBP13.24□□□□□ -0.29
PDZD4-201ENST00000164640 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
PDZD4-201ENST00000164640 ZNF160Q9HCG1 818 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 DKKL1Q9UK85 242 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 HMGB3O15347 200 aaKnown RBP13.24□□□□□ -0.29
PDZD4-201ENST00000164640 SRP19P09132 144 aaKnown RBP13.24□□□□□ -0.29
PDZD4-201ENST00000164640 MTCP1P56278 107 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 SCGB1C1Q8TD33 95 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 CERS4Q9HA82 394 aa13.24□□□□□ -0.29
PDZD4-201ENST00000164640 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 GABREP78334 506 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 COL13A1Q5TAT6 717 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 LRRC18Q8N456 261 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 ZNF519Q8TB69 540 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 MRPL37Q9BZE1 423 aaKnown RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 TPSD1Q9BZJ3 242 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 ZNF442Q9H7R0 627 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 GPR173Q9NS66 373 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 FOXD3Q9UJU5 478 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 SPRY1O43609 319 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 HOXB2P14652 356 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 NUTF2P61970 127 aaKnown RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 HSD11B2P80365 405 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 TNFRSF9Q07011 255 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 CLN3Q13286 438 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 SPRED2Q7Z698 418 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 RNF133Q8WVZ7 376 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 FAM206AQ9NX38 181 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 EML5Q05BV3 1969 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 UNC13CQ8NB66 2214 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 A0A1W2PR80 420 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 M0R143 59 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 MASP2O00187 686 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 HSD17B6O14756 317 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 CTSDP07339 412 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 CELA2BP08218 269 aaPredicted RBP13.23□□□□□ -0.29
PDZD4-201ENST00000164640 C2orf88Q9BSF0 95 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 NDUFAF3Q9BU61 184 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 NECAP2Q9NVZ3 263 aa13.23□□□□□ -0.29
PDZD4-201ENST00000164640 PHF3Q92576 2039 aaKnown RBP13.22□□□□□ -0.29
PDZD4-201ENST00000164640 C9J4A7 227 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 TNFSF14O43557 240 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 NCR3LG1Q68D85 454 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 Q6ZSR6 202 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 MVB12AQ96EY5 273 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 MCTS1Q9ULC4 181 aaKnown RBP13.22□□□□□ -0.29
PDZD4-201ENST00000164640 TGOLN2O43493 480 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 COX5BP10606 129 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 CFPP27918 469 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 DYNLT3P51808 116 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 H1FNTQ75WM6 255 aaPredicted RBP13.22□□□□□ -0.29
PDZD4-201ENST00000164640 UEVLDQ8IX04 471 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 LIPHQ8WWY8 451 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 ELSPBP1Q96BH3 223 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 HIST1H2AAQ96QV6 131 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 KIAA1456Q9P272 454 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 TP53TG5Q9Y2B4 290 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 NOTCH4Q99466 2003 aa13.22□□□□□ -0.29
PDZD4-201ENST00000164640 TDRD6O60522 2096 aaKnown RBP13.22□□□□□ -0.29
PDZD4-201ENST00000164640 A0A0U1RQK1 487 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 NKX2-6A6NCS4 301 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 A6NNC1 897 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 ELLP55199 621 aaPredicted RBP13.21□□□□□ -0.29
PDZD4-201ENST00000164640 QRFPP83859 136 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 ZNF154Q13106 437 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 ARL6IP1Q15041 203 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 LBHQ53QV2 105 aaPredicted RBP13.21□□□□□ -0.29
PDZD4-201ENST00000164640 GRINAQ7Z429 371 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 OR10A7Q8NGE5 316 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 TMEM234Q8WY98 164 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 ANXA10Q9UJ72 324 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 PIGLQ9Y2B2 252 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.21□□□□□ -0.29
PDZD4-201ENST00000164640 GOLT1BQ9Y3E0 138 aa13.21□□□□□ -0.29
PDZD4-201ENST00000164640 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.29
PDZD4-201ENST00000164640 CRYM-AS1A6NIL9 109 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms