RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SPATA46Q5T0L3 261 aa18.91■□□□□ 0.62
HOXC8-201ENST00000040584 ZNF843Q8N446 348 aa18.91■□□□□ 0.62
HOXC8-201ENST00000040584 OR4D6Q8NGJ1 314 aa18.91■□□□□ 0.62
HOXC8-201ENST00000040584 OR13C9Q8NGT0 318 aa18.91■□□□□ 0.62
HOXC8-201ENST00000040584 SCARB1Q8WTV0 552 aa18.91■□□□□ 0.62
HOXC8-201ENST00000040584 CNTD2Q9H8S5 307 aa18.91■□□□□ 0.62
HOXC8-201ENST00000040584 IGHV2OR16-5A0A0B4J2B6 119 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 J3QW42 95 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 NAAAQ02083 359 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 FBXL19-AS1Q494R0 122 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 LIN54Q6MZP7 749 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 MRPL21Q7Z2W9 205 aaKnown RBP18.9■□□□□ 0.62
HOXC8-201ENST00000040584 ZDHHC22Q8N966 263 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 OR5L1Q8NGL2 311 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 PP6455Q8WZ26 134 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 DHRS9Q9BPW9 319 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 PLEKHA6Q9Y2H5 1048 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 RAB27BO00194 218 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 ARPC5O15511 151 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 THBDP07204 575 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 ERVS71-1P61550 626 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 PPP1CBP62140 327 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 DMRTC1Q5HYR2 192 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 FAHD2BQ6P2I3 314 aaPredicted RBP18.9■□□□□ 0.62
HOXC8-201ENST00000040584 OR2W3Q7Z3T1 314 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 WFDC8Q8IUA0 241 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 LRRC20Q8TCA0 184 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 RNASE6Q93091 150 aaKnown RBP18.9■□□□□ 0.62
HOXC8-201ENST00000040584 FAHD2AQ96GK7 314 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 NKX3-1Q99801 234 aaPredicted RBP18.9■□□□□ 0.62
HOXC8-201ENST00000040584 CHST5Q9GZS9 411 aa18.9■□□□□ 0.62
HOXC8-201ENST00000040584 ADGRG4Q8IZF6 3080 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 GRNP28799 593 aaKnown RBP18.89■□□□□ 0.61
HOXC8-201ENST00000040584 BAMBIQ13145 260 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 SNTB1Q13884 538 aaKnown RBP18.89■□□□□ 0.61
HOXC8-201ENST00000040584 C3orf36Q3SXR2 165 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 RNASE10Q5GAN6 216 aaKnown RBP18.89■□□□□ 0.61
HOXC8-201ENST00000040584 TMEM65Q6PI78 240 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 OR5AS1Q8N127 324 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 WFIKKN1Q96NZ8 548 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 TINAGL1Q9GZM7 467 aaPredicted RBP18.89■□□□□ 0.61
HOXC8-201ENST00000040584 CHST6Q9GZX3 395 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 ARL6Q9H0F7 186 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 RDH8Q9NYR8 311 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 SESN1Q9Y6P5 492 aa18.89■□□□□ 0.61
HOXC8-201ENST00000040584 FXYD6-FXYD2A0A087WZ82 144 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 IGKV1-9A0A0C4DH69 117 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 C1QL1O75973 258 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 CD8AP01732 235 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 QRFPP83859 136 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 CDNFQ49AH0 187 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 GSG1LQ6UXU4 331 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 OR1J1Q8NGS3 322 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 RBPMSQ93062 196 aaKnown RBP18.88■□□□□ 0.61
HOXC8-201ENST00000040584 OR2J1Q9GZK6 312 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 FXYD6Q9H0Q3 95 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 OPA3Q9H6K4 179 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 KCNJ16Q9NPI9 418 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 A0A0D9SG52 128 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 SIX6O95475 246 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 HLA-GP17693 338 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 C2orf68Q2NKX9 166 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 ATPAF1Q5TC12 328 aaPredicted RBP18.88■□□□□ 0.61
HOXC8-201ENST00000040584 OR56B2PQ8NGI1 322 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 OR52N4Q8NGI2 321 aa18.88■□□□□ 0.61
HOXC8-201ENST00000040584 HEATR1Q9H583 2144 aaKnown RBP18.87■□□□□ 0.61
HOXC8-201ENST00000040584 A0A1B0GW55 424 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 hCG_1807616A0A1W2PRN6 198 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 M0QYG6 137 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 ZG16O60844 167 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 DUX4L2P0CJ85 424 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 DUX4L3P0CJ86 424 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 DUX4L4P0CJ87 422 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 DUX4L5P0CJ88 424 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 DUX4L6P0CJ89 424 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 DUX4L7P0CJ90 424 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 UBE2V2Q15819 145 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 MOGAT2Q3SYC2 334 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 TMEM42Q69YG0 159 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 TRAPPC6BQ86SZ2 158 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 SLC51BQ86UW2 128 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 SLC25A42Q86VD7 318 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 SLC25A40Q8TBP6 338 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 DUX4Q9UBX2 424 aa18.87■□□□□ 0.61
HOXC8-201ENST00000040584 TMEM235A6NFC5 223 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 ZNF93P35789 620 aaPredicted RBP18.86■□□□□ 0.61
HOXC8-201ENST00000040584 TMED4Q7Z7H5 227 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 ACBD4Q8NC06 268 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 CHST4Q8NCG5 386 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 SLC6A7Q99884 636 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 MFFQ9GZY8 342 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 TMEM14DPA8MWL7 114 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 CRYAAP02489 173 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 UBBP0CG47 229 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 VSIG8P0DPA2 414 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 CD40P25942 277 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 CD34P28906 385 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 OR10K2Q6IF99 312 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 OR5M8Q8NGP6 311 aa18.86■□□□□ 0.61
HOXC8-201ENST00000040584 OR10R2Q8NGX6 335 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms