RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 RASL10BQ96S79 203 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 NAA60Q9H7X0 242 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 KCNIP3Q9Y2W7 256 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 NSG2Q9Y328 171 aa12.21□□□□□ -0.45
USH1C-201ENST00000005226 ZNF727A8MUV8 499 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 CLN5O75503 358 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 IGLV3-1P01715 115 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 ALDH3B1P43353 468 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.46
USH1C-201ENST00000005226 SMRP1Q8NCR6 262 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 HPSE2Q8WWQ2 592 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 SLAMF9Q96A28 289 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 PLEKHA2Q9HB19 425 aa12.21□□□□□ -0.46
USH1C-201ENST00000005226 FAM24AA6NFZ4 105 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 CDRT15L2A8MXV6 281 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 TLX3O43711 291 aaPredicted RBP12.2□□□□□ -0.46
USH1C-201ENST00000005226 ZFAND5O76080 213 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 NXPH3O95157 252 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 GLB1P16278 677 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 MSX1P28360 303 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 GLP1RP43220 463 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 FBXW12Q6X9E4 464 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 SLC22A8Q8TCC7 542 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 NABP1Q96AH0 204 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 LUZP4Q9P127 313 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 POMT1Q9Y6A1 747 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 BORCS7-ASMTA0A0B4J1R7 106 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 PHF1O43189 567 aaPredicted RBP12.2□□□□□ -0.46
USH1C-201ENST00000005226 SCRG1O75711 98 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 ONECUT2O95948 504 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 FBP1P09467 338 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 SLC35A1P78382 337 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 ACER2Q5QJU3 275 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 ZNF565Q8N9K5 539 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 OR5L2Q8NGL0 311 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 DEFB126Q9BYW3 111 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 TGIF2Q9GZN2 237 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 ARV1Q9H2C2 271 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 KCNJ16Q9NPI9 418 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 SLC2A9Q9NRM0 540 aa12.2□□□□□ -0.46
USH1C-201ENST00000005226 IGKV1-12A0A0C4DH73 117 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 GPR137BO60478 399 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 IGKV1D-12P01611 117 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 P2RY1P47900 373 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 NSUN5P2Q63ZY6 315 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 Q6ZPA2 131 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 RNF138Q8WVD3 245 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 PP6455Q8WZ26 134 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 ZNF251Q9BRH9 671 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 GINS3Q9BRX5 216 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 BCL2L14Q9BZR8 327 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 MAGT1Q9H0U3 335 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 METTL9Q9H1A3 318 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
USH1C-201ENST00000005226 NECAP2Q9NVZ3 263 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 WNT16Q9UBV4 365 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 MMP24Q9Y5R2 645 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 CELSR3Q9NYQ7 3312 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 A0A0U1RQV5 110 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 RRP8O43159 456 aaKnown RBP12.19□□□□□ -0.46
USH1C-201ENST00000005226 CD63P08962 238 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 SMIM6P0DI80 62 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 CTSSP25774 331 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 LBX1P52954 281 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 RNF212Q495C1 297 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 ZNF774Q6NX45 483 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 FBXL14Q8N1E6 418 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 EDARADDQ8WWZ3 215 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 TCEAL3Q969E4 200 aa12.19□□□□□ -0.46
USH1C-201ENST00000005226 DHHO43323 396 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 YIF1AO95070 293 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 LSM6P62312 80 aaKnown RBP12.18□□□□□ -0.46
USH1C-201ENST00000005226 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 ZFP62Q8NB50 900 aaPredicted RBP12.18□□□□□ -0.46
USH1C-201ENST00000005226 ADPRHL1Q8NDY3 354 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 OR10AD1Q8NGE0 317 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 SPACA9Q96E40 222 aaPredicted RBP12.18□□□□□ -0.46
USH1C-201ENST00000005226 TP53RKQ96S44 253 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 NSG1A0A0A6YYJ2 146 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
USH1C-201ENST00000005226 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
USH1C-201ENST00000005226 POLR2GP62487 172 aaKnown RBP eCLIP12.18□□□□□ -0.46
USH1C-201ENST00000005226 RAET1LQ5VY80 246 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 SLC35G3Q8N808 338 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 MSI2Q96DH6 328 aaKnown RBP12.18□□□□□ -0.46
USH1C-201ENST00000005226 C18orf12Q96KH6 178 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 SLC35B3Q9H1N7 401 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 P4HTMQ9NXG6 502 aa12.18□□□□□ -0.46
USH1C-201ENST00000005226 IGLV3-12A0A075B6K2 115 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 NKX2-6A6NCS4 301 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 NPIPA2E9PIF3 369 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 NPIPA3F8WFD2 350 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 EIF1BO60739 113 aaKnown RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 LCATP04180 440 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 S100A8P05109 93 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 226 ms