RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 March7Q9WV66 693 aa10.3□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Parp4E9PYK3 1969 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 FggyA2AJL3 552 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r7E9Q8T0 311 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 P01634 136 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 MybphlQ5FW53 355 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 PmelQ60696 626 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gnb3Q61011 340 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Phox2aQ62066 280 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Lcn4Q62472 185 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Klhl24Q8BRG6 600 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Alg12Q8VDB2 486 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Calhm2Q8VEC4 323 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr135Q8VEY4 312 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr593Q8VF28 327 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc7a12Q8VIE6 465 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Adipor1Q91VH1 375 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Polr2hQ923G2 150 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Rep15Q9D7T1 230 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Bola1Q9D8S9 137 aaKnown RBP10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Aurkaip1Q9DCJ7 200 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Chrm2Q9ERZ4 466 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Tspan32Q9JHH2 256 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 ClnkQ9QZE2 435 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Efemp2Q9WVJ9 443 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr685A0A1L1SVG7 331 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr1289A0A288CFY5 326 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr329-psM9MMK4 331 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Igf2P09535 180 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Sdc1P18828 311 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Id4P41139 161 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 CapzbP47757 277 aaKnown RBP10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 RpiaP47968 303 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Bmp8bP55105 399 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Polr1dP97304 133 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Zfp235Q499D5 702 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc5a12Q49B93 619 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc17a1Q61983 465 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 CstbQ62426 98 aaKnown RBP10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Nol4lQ6DIB4 494 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gal3st2Q6XQH0 394 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc22a18Q78KK3 406 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Igsf21Q7TNR6 468 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr1148Q7TR35 314 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 ClmQ7TSN2 230 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Slc35d3Q8BGF8 422 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Commd1Q8K4M5 188 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr46Q8VGJ4 318 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr522Q8VGL1 312 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 HikeshiQ9DD02 197 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Ap4m1Q9JKC7 449 aa10.29□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Wnk2Q3UH66 2149 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm20390E9PZF0 267 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr623E9Q382 317 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gpld1O70362 837 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Hsd17b8P50171 259 aaKnown RBP10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Nme2Q01768 152 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr18Q0VAX9 331 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 EnkurQ6SP97 255 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr1173Q7TR24 312 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 TMEM229BQ8BFQ2 167 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Coq3Q8BMS4 370 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 SheQ8BSD5 492 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Clec2hQ8C1T8 218 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Nfam1Q8R4V1 264 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 NubplQ9CWD8 319 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Fxyd6Q9D164 94 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Erv3Q9DAX3 200 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Nckap5E9QAE1 1909 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 2010106E10RikA2ANY3 279 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Olfr424E9Q0Q2 315 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Psg20E9Q9B4 475 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Mex3aG3UYU0 520 aaKnown RBP10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Cpne2P59108 548 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Cpeb1P70166 561 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Fgf14P70379 247 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 CtrcQ3SYP2 268 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Hs3st6Q5GFD5 342 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Ptpmt1Q66GT5 193 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Zfp747Q8BHM7 422 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r189Q8K3N3 312 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r231Q8R2A3 311 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Vmn1r21Q8R2C6 297 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Commd5Q8R395 224 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 2210010C04RikQ9CPN9 247 aaKnown RBP10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 S100a16Q9D708 124 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Iqcf5Q9DAL7 148 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Bbs10Q9DBI2 713 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 C1galt1c1Q9JMG2 316 aa10.28□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Hbb-bh2B2RVB7 147 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Macc1E9PXX8 851 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gm8882E9Q7E4 283 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Ighg2cF6TQW2 404 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 AipO08915 330 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 P01864 335 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Gabrr1P56475 480 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Fahd2Q3TC72 313 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Zdhhc8Q5Y5T5 762 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Zfp954Q7TNU5 416 aa10.27□□□□□ -0.76
Col9a1-202ENSMUST00000088349 Las2Q8CB14 526 aa10.27□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms