RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 FarsaQ8C0C7 508 aa10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 RetnlgQ8K426 117 aa10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Znf385aQ8VD12 386 aaKnown RBP10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr599Q8VG01 315 aa10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 CutcQ9D8X1 272 aa10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Lypd2Q9DD23 127 aa10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr938Q9EQ93 315 aa10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Fer1l5P0DM40 2038 aa10.32□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Igkv6-29A0A0G2JEI6 115 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Gm609E9Q573 300 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Rpl3P27659 403 aaKnown RBP10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Rpa2Q62193 270 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Slc46a1Q6PEM8 459 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Znrf2Q71FD5 238 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Actbl2Q8BFZ3 376 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Defb22Q8BVC1 179 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr410Q8VFX7 315 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr402Q8VFX8 315 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Klhdc8aQ91XA8 350 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Ccdc3Q9D6Y1 273 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Ndrg2Q9QYG0 371 aaKnown RBP10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Cdh20Q9Z0M3 801 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Ighv6-4A0A0A6YX19 119 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr1532-ps1A0A0R4J8U2 307 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Cyb561d1A2AE42 229 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr707K7N662 307 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 PlauP06869 433 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 MagP20917 626 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Fut10Q5F2L2 481 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Tle4Q62441 773 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Tas2r136Q7TQA8 305 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr270Q7TS19 314 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Cdk3Q80YP0 303 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Dppa1Q810Y7 116 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Rab39bQ8BHC1 213 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Faap24Q8BHL6 221 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Q8CF25 301 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Vmn1r226Q8R2A8 298 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 HpgdQ8VCC1 269 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Gid4Q9CPY6 217 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Ctag2Q9D9S4 219 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Slc2a8Q9JIF3 477 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Atg2bQ80XK6 2075 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Rev3lQ61493 3122 aa10.31□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Vmn1r90A0A087WR36 309 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Lao1B1ARV3 523 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Tmed7D3YZZ5 224 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Adamtsl5D3Z689 485 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Cdk5r2O35926 369 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Gata3P23772 443 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Slc6a9P28571 692 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Acta2P62737 377 aaKnown RBP10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Actg2P63268 376 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Actc1P68033 377 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Acta1P68134 377 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Crmp1P97427 572 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Cib3Q0P523 160 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Defb25Q30KN8 71 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Nxt2Q3UNA4 142 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Lyg2Q3V1I0 213 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Gpr173Q6PI62 373 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Flrt1Q6RKD8 674 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 MrgprhQ99MT8 321 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Atp5sQ9CRA7 200 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Q9DAE8 263 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Slc46a3Q9DC26 460 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr1493-ps1A0A140LHU2 316 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Amd2D3Z6H8 334 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Tex45G3XA23 500 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Vmn1r103K7N6X7 305 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Vmn1r151L7N288 305 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Sod2P09671 222 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Map3k8Q07174 467 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Cobll1Q3UMF0 1273 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Q8BHG2 160 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 SowahbQ8BZW2 760 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr474Q8VFC9 310 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr700Q8VFM5 316 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr394Q8VGR5 310 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Tmem63aQ91YT8 804 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Tmem128Q9CZB9 163 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Zfp54E9PW05 585 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Agpat1O35083 285 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Phb2O35129 299 aaKnown RBP10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Amd1P0DMN7 334 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Ca3P16015 260 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr629Q0VBH3 314 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Rnf44Q3UHJ8 407 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Serinc4Q5XK03 492 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Trappc6aQ78XR0 159 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Rnf222Q8CEF8 211 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr480Q8VEZ0 312 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr678Q8VG26 313 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr508Q8VG42 310 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Olfr283Q8VGU2 309 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 OgfrQ99PG2 633 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 LipfQ9CPP7 395 aa10.3□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Gm28897A0A087WP44 222 aa10.29□□□□□ -0.76
Sdc1-201ENSMUST00000020911 D830044I16RikA0A1D5RM53 117 aa10.29□□□□□ -0.76
Sdc1-201ENSMUST00000020911 Rsg1A2A825 258 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms