RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RSU1Q15404 277 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 RAB11BQ15907 218 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 C2orf76Q3KRA6 126 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 HES5Q5TA89 166 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 AWAT2Q6E213 333 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 ELP2Q6IA86 826 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
LINC00339-213ENST00000642137 SLAMF9Q96A28 289 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 CEP19Q96LK0 163 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 NKX3-1Q99801 234 aaPredicted RBP10.36□□□□□ -0.75
LINC00339-213ENST00000642137 NRIP2Q9BQI9 281 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 MRI1Q9BV20 369 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 HES4Q9HCC6 221 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 NPTNQ9Y639 398 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 PTPN13Q12923 2485 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 AKAP6Q13023 2319 aa10.36□□□□□ -0.75
LINC00339-213ENST00000642137 PPIAL4EA0A075B759 164 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 SMIM30A4D0T7 59 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 PPIAL4DF5H284 164 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 BPNT1O95861 308 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 CSTBP04080 98 aaKnown RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 PPIAL4FP0DN26 164 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 CALCBP10092 127 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 SLC2A2P11168 524 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 ARSBP15848 533 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 BCL3P20749 454 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 GIFP27352 417 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 NPBWR2P48146 333 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 SCAND1P57086 179 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 HNRNPA0Q13151 305 aaKnown RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 DYNC1I2Q13409 638 aaKnown RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 DGUOKQ16854 277 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 IDNKQ5T6J7 187 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 FOXB2Q5VYV0 432 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 TEX36Q5VZQ5 186 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 PRSS57Q6UWY2 283 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 ACP7Q6ZNF0 438 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 CDH24Q86UP0 819 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 FAM90A1Q86YD7 464 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 FAM58AQ8N1B3 248 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 KCNG3Q8TAE7 436 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 DYNC2LI1Q8TCX1 351 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 RAB1CQ92928 201 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 FAM3DQ96BQ1 224 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 MRPS24Q96EL2 167 aaKnown RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 PERPQ96FX8 193 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 POM121Q96HA1 1249 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 C1orf147Q96MC9 270 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 SEBOXQ9HB31 216 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 ELL3Q9HB65 397 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-213ENST00000642137 ABRACLQ9P1F3 81 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 FBLN5Q9UBX5 448 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 DAPK2Q9UIK4 370 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 PPIAL4AQ9Y536 164 aa10.35□□□□□ -0.75
LINC00339-213ENST00000642137 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 TMEM14DPA8MWL7 114 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 CLDN25C9JDP6 229 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 F8VVB4 439 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 F8VWA3 439 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 LGALS8O00214 317 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 NDUFS8O00217 210 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 NXPH2O95156 264 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 HTR3BO95264 441 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 SFTPBP07988 381 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 ZNF182P17025 639 aaPredicted RBP10.34□□□□□ -0.75
LINC00339-213ENST00000642137 EGR1P18146 543 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 SOX6P35712 828 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 CLDN12P56749 244 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 QRFPP83859 136 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 P2RY14Q15391 338 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 DNM1P46Q6ZS02 220 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 OR2W3Q7Z3T1 314 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 OR51D1Q8NGF3 324 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 OR51T1Q8NGJ9 327 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 PTX4Q96A99 478 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 KCTD12Q96CX2 325 aaKnown RBP10.34□□□□□ -0.75
LINC00339-213ENST00000642137 TIMD4Q96H15 378 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 ZNF488Q96MN9 340 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 BARHL1Q9BZE3 327 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 TMEM165Q9HC07 324 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 HMG20AQ9NP66 347 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 DCAF16Q9NXF7 216 aa10.34□□□□□ -0.75
LINC00339-213ENST00000642137 NBPF19A0A087WUL8 3843 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 DCHS2Q6V1P9 2916 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 OOEPA6NGQ2 149 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 TNFRSF13BO14836 293 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 WNT9BO14905 357 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 LDLRAD4O15165 306 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 PPIHO43447 177 aaKnown RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 NDUFA2O43678 99 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 GTF2F2P13984 249 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 SERPINA2P20848 420 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 RBMXP38159 391 aaKnown RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 GPR6P46095 362 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 FGF12P61328 243 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 KCNJ8Q15842 424 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 MICBQ29980 383 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms