RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 A0A1W2PPH5 198 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF254O75437 659 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 RPP14O95059 124 aaKnown RBP13.53□□□□□ -0.24
PHGDH-213ENST00000641272 APOL3O95236 402 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 KIR2DS4P43632 304 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 RAB13P51153 203 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 DAPP51397 102 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 PTGES3Q15185 160 aaKnown RBP13.53□□□□□ -0.24
PHGDH-213ENST00000641272 BEAN1Q3B7T3 259 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 NSUN5P1Q3KNT7 163 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 SSX6Q7RTT6 188 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 TCEANCQ8N8B7 351 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 OR14K1Q8NGZ2 314 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 RANBP3Q9H6Z4 567 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-213ENST00000641272 ZNF702PQ9H963 129 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 RAB18Q9NP72 206 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 V9GYS6 101 aa13.53□□□□□ -0.24
PHGDH-213ENST00000641272 A0A1B0GTI1 187 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 FAM230AA0A1W2PPH8 454 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 TCRBV3S1A0A5B6 114 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 ZNF670-ZNF695F2Z2N8 137 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 TK1P04183 234 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 ARG1P05089 322 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 JUNBP17275 347 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-213ENST00000641272 EPHA2P29317 976 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 EDDM3BP56851 147 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 COL10A1Q03692 680 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 FAM189A2Q15884 450 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 TMEM42Q69YG0 159 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 FAHD1Q6P587 224 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 ELMOD2Q8IZ81 293 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 PIFOQ8TCI5 191 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 CFHR4Q92496 578 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 PLEKHA1Q9HB21 404 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 ADGRL4Q9HBW9 690 aa13.52□□□□□ -0.25
PHGDH-213ENST00000641272 MRM2Q9UI43 246 aaKnown RBP13.52□□□□□ -0.25
PHGDH-213ENST00000641272 DLGAP1O14490 977 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 GYG2O15488 501 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 OPN1MWP04001 364 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 OPN1MW2P0DN77 364 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 OPN1MW3P0DN78 364 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 DLX6P56179 175 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 EDDM3AQ14507 147 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 TMEM95Q3KNT9 176 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 LDLRAD2Q5SZI1 272 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 CCBE1Q6UXH8 406 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-213ENST00000641272 MEPCEQ7L2J0 689 aaKnown RBP13.51□□□□□ -0.25
PHGDH-213ENST00000641272 DNAJC9Q8WXX5 260 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 SLAMF9Q96A28 289 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 OR5M11Q96RB7 305 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 IL4I1Q96RQ9 567 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 CADM1Q9BY67 442 aaKnown RBP13.51□□□□□ -0.25
PHGDH-213ENST00000641272 PRRG3Q9BZD7 231 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 HES4Q9HCC6 221 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 KRT84Q9NSB2 600 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 TCF19Q9Y242 345 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 POMPQ9Y244 141 aa13.51□□□□□ -0.25
PHGDH-213ENST00000641272 hCG_1809904A0A1W2PP81 198 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 A0A1W2PPE2 198 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 A0A1W2PR64 198 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 A0A1W2PRV1 198 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 F8VVB4 439 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 F8VWA3 439 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 FBXO24O75426 580 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 CD28P10747 220 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 MPZP25189 248 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 DYNC1I2Q13409 638 aaKnown RBP13.5□□□□□ -0.25
PHGDH-213ENST00000641272 SSX2Q16385 188 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 AANATQ16613 207 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 DNAL1Q4LDG9 190 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 ARSJQ5FYB0 599 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-213ENST00000641272 AADACL4Q5VUY2 407 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 TCF23Q7RTU1 214 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 TPRX1Q8N7U7 411 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 YIPF7Q8N8F6 280 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 ABCB10Q9NRK6 738 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 CLN6Q9NWW5 311 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 IL36RNQ9UBH0 155 aa13.5□□□□□ -0.25
PHGDH-213ENST00000641272 IGKV1-27A0A075B6S5 117 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 ODF3BA8MYP8 253 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 NOS1APO75052 506 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-213ENST00000641272 SNU13P55769 128 aaKnown RBP13.49□□□□□ -0.25
PHGDH-213ENST00000641272 ERVK11-1P61568 191 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 SLX4IPQ5VYV7 408 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 NXNL2Q5VZ03 156 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 C11orf88Q6PI97 169 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 LIAT1Q6ZQX7 453 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 TMEM163Q8TC26 289 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 FOXRED1Q96CU9 486 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-213ENST00000641272 CEP19Q96LK0 163 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 SERTAD4Q9NUC0 356 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 H2AFY2Q9P0M6 372 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-213ENST00000641272 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHGDH-213ENST00000641272 SNX5Q9Y5X3 404 aa13.49□□□□□ -0.25
PHGDH-213ENST00000641272 ZAR1LA6NP61 321 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 C17orf98A8MV24 154 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 K7N7A8 449 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 ZNF737O75373 536 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 KRT8P05787 483 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms