RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CNN3Q15417 329 aaKnown RBP22.13■■□□□ 1.13
VEGFA-231ENST00000640499 ZNF529Q6P280 563 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 OR13C9Q8NGT0 318 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 GHSRQ92847 366 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 BORCS8Q96FH0 119 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 CDCA4Q9BXL8 241 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 ZCCHC4Q9H5U6 513 aa22.13■■□□□ 1.13
VEGFA-231ENST00000640499 PLATP00750 562 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 SOX2P48431 317 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 DGUOKQ16854 277 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 CD177Q8N6Q3 437 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 SPACA5Q96QH8 159 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 DNTTIP1Q9H147 329 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 RAB26Q9ULW5 256 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 DHDHQ9UQ10 334 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 POLDIP2Q9Y2S7 368 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 LSM2Q9Y333 95 aaKnown RBP22.12■■□□□ 1.13
VEGFA-231ENST00000640499 MAB21L2Q9Y586 359 aa22.12■■□□□ 1.13
VEGFA-231ENST00000640499 ALX3O95076 343 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 RPSAP08865 295 aaKnown RBP22.11■■□□□ 1.13
VEGFA-231ENST00000640499 PRKACBP22694 351 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 CRHBPP24387 322 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 RBP2P50120 134 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 WNT4P56705 351 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 KRTAP21-3Q3LHN1 58 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 SLC25A26Q70HW3 274 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 SERPINA12Q8IW75 414 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 GPR148Q8TDV2 347 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 SLAMF9Q96A28 289 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 SPSB1Q96BD6 273 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 CNBD2Q96M20 576 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 OPALINQ96PE5 141 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 NUDT16L1Q9BRJ7 211 aaKnown RBP22.11■■□□□ 1.13
VEGFA-231ENST00000640499 SCN3BQ9NY72 215 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 METRNQ9UJH8 293 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 ZNF281Q9Y2X9 895 aa22.11■■□□□ 1.13
VEGFA-231ENST00000640499 TRBV5-5A0A0J9YX44 114 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 SIGLEC5O15389 551 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 SRP14P37108 136 aaKnown RBP22.1■■□□□ 1.13
VEGFA-231ENST00000640499 ATP1B3P54709 279 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 MTCP1P56278 107 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 IKZF1Q13422 519 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 KLF17Q5JT82 389 aaPredicted RBP22.1■■□□□ 1.13
VEGFA-231ENST00000640499 BTN2A1Q7KYR7 527 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 C1QL2Q7Z5L3 287 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 TSEN15Q8WW01 171 aaKnown RBP22.1■■□□□ 1.13
VEGFA-231ENST00000640499 MYDGFQ969H8 173 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 OR5M11Q96RB7 305 aa22.1■■□□□ 1.13
VEGFA-231ENST00000640499 IGKV1-12A0A0C4DH73 117 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 RFPL4AA6NLU0 287 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 RFPL4AL1F8VTS6 287 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 MYL12BO14950 172 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 IGKV1D-12P01611 117 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 CEBPDP49716 269 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-231ENST00000640499 SLC36A1Q7Z2H8 476 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 OR51A2Q8NGJ7 313 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 ST8SIA4Q92187 359 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 RFT1Q96AA3 541 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 ORAI1Q96D31 301 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 SDSLQ96GA7 329 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 ERGIC3Q9Y282 383 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 TPRKBQ9Y3C4 175 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 AUP1Q9Y679 476 aa22.09■■□□□ 1.13
VEGFA-231ENST00000640499 PNMA8CA0A1B0GUJ8 204 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 INMTO95050 263 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 GABRA2P47869 451 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 NPBWR2P48146 333 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 PDZK1IP1Q13113 114 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 LHFPL2Q6ZUX7 228 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 ZNRF1Q8ND25 227 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 OR5D14Q8NGL3 314 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 CEP19Q96LK0 163 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 TAS2R4Q9NYW5 299 aa22.08■■□□□ 1.13
VEGFA-231ENST00000640499 SPRY1O43609 319 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-231ENST00000640499 SULT1B1O43704 296 aa22.07■■□□□ 1.12
VEGFA-231ENST00000640499 NXPH2O95156 264 aa22.07■■□□□ 1.12
VEGFA-231ENST00000640499 IL13RA1P78552 427 aa22.07■■□□□ 1.12
VEGFA-231ENST00000640499 ACSM1Q08AH1 577 aa22.07■■□□□ 1.12
VEGFA-231ENST00000640499 SMIM21Q3B7S5 101 aa22.07■■□□□ 1.12
VEGFA-231ENST00000640499 CD276Q5ZPR3 534 aa22.07■■□□□ 1.12
VEGFA-231ENST00000640499 LY6G5BQ8NDX9 201 aa22.07■■□□□ 1.12
VEGFA-231ENST00000640499 FBN1P35555 2871 aaKnown RBP22.07■■□□□ 1.12
VEGFA-231ENST00000640499 NDUFB3O43676 98 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 ANGPTL7O43827 346 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 CD1AP06126 327 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 OCM2P0CE71 109 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 PRDX2P32119 198 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 POU3F4P49335 361 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 ZP1P60852 638 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 BTNL3Q6UXE8 466 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 TMEM106AQ96A25 262 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 MED30Q96HR3 178 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 ZNF184Q99676 751 aaPredicted RBP22.06■■□□□ 1.12
VEGFA-231ENST00000640499 MRI1Q9BV20 369 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 RBFOX1Q9NWB1 397 aaKnown RBP22.06■■□□□ 1.12
VEGFA-231ENST00000640499 IL36RNQ9UBH0 155 aa22.06■■□□□ 1.12
VEGFA-231ENST00000640499 RPUSD1Q9UJJ7 312 aaKnown RBP22.06■■□□□ 1.12
VEGFA-231ENST00000640499 NKX6-3A6NJ46 265 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 ENSAO43768 121 aaKnown RBP22.05■■□□□ 1.12
VEGFA-231ENST00000640499 CELP19835 753 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms