RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NXPH2O95156 264 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 ALDOBP05062 364 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4L2P0CJ85 424 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4L3P0CJ86 424 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4L4P0CJ87 422 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4L5P0CJ88 424 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4L6P0CJ89 424 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4L7P0CJ90 424 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 TMEM225BP0DP42 221 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 FOSL1P15407 271 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 RPS2P15880 293 aaKnown RBP11.02□□□□□ -0.65
GTF3A-209ENST00000640289 MUC1P15941 1255 aaPredicted RBP11.02□□□□□ -0.65
GTF3A-209ENST00000640289 ZNF16P17020 682 aaPredicted RBP11.02□□□□□ -0.65
GTF3A-209ENST00000640289 ADRA2CP18825 462 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 AMY2BP19961 511 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 BCL3P20749 454 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 ZNF93P35789 620 aaPredicted RBP11.02□□□□□ -0.65
GTF3A-209ENST00000640289 OR3A4PP47883 348 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 NPBWR2P48146 333 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 CD200R1LQ6Q8B3 271 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4L9Q6RFH8 374 aaPredicted RBP11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DCDC5Q6ZRR9 648 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 C1QL2Q7Z5L3 287 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 LRRTM1Q86UE6 522 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 MKXQ8IYA7 352 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 TNFAIP8L1Q8WVP5 186 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 CEP19Q96LK0 163 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 CCL13Q99616 98 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 GSX1Q9H4S2 264 aaPredicted RBP11.02□□□□□ -0.65
GTF3A-209ENST00000640289 LPAR2Q9HBW0 351 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 HES4Q9HCC6 221 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 RBFOX1Q9NWB1 397 aaKnown RBP11.02□□□□□ -0.65
GTF3A-209ENST00000640289 IL36RNQ9UBH0 155 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 CTSZQ9UBR2 303 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 DUX4Q9UBX2 424 aa11.02□□□□□ -0.65
GTF3A-209ENST00000640289 IGKV1D-17A0A075B6S4 117 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 TRDV1A0A1B0GX56 115 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 OR2AT4A6NND4 320 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 TRAPPC2LH3BP13 241 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 ADAM20O43506 726 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 CYB5AP00167 134 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 ACAA1P09110 424 aaPredicted RBP11.01□□□□□ -0.65
GTF3A-209ENST00000640289 WNT2P09544 360 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 PSG2P11465 335 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 JUNBP17275 347 aaPredicted RBP11.01□□□□□ -0.65
GTF3A-209ENST00000640289 SRMP19623 302 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 CALRP27797 417 aaKnown RBP11.01□□□□□ -0.65
GTF3A-209ENST00000640289 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
GTF3A-209ENST00000640289 STUMQ69YW2 141 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 JAGN1Q8N5M9 183 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 FAM216BQ8N7L0 139 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 ANGPTL6Q8NI99 470 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 RAB39BQ96DA2 213 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 MSI2Q96DH6 328 aaKnown RBP11.01□□□□□ -0.65
GTF3A-209ENST00000640289 C1orf159Q96HA4 380 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 FAM192AQ9GZU8 254 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 OR51E2Q9H255 320 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 SMURF1Q9HCE7 757 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 VCX3AQ9NNX9 186 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 EXOSC4Q9NPD3 245 aaKnown RBP11.01□□□□□ -0.65
GTF3A-209ENST00000640289 RASL12Q9NYN1 266 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 MIOXQ9UGB7 285 aa11.01□□□□□ -0.65
GTF3A-209ENST00000640289 SHISA3A0PJX4 238 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 FCN3O75636 299 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 ARL6IP5O75915 188 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 KDM4BO94953 1096 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 CDRT1O95170 752 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 LY6G6DO95868 133 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 HEXAP06865 529 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 SFTPBP07988 381 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 SELLP14151 372 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 CD36P16671 472 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
GTF3A-209ENST00000640289 GABRA2P47869 451 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 GZMKP49863 264 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 SNU13P55769 128 aaKnown RBP11□□□□□ -0.65
GTF3A-209ENST00000640289 KCNJ8Q15842 424 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 SMIM21Q3B7S5 101 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 CYB5R2Q6BCY4 276 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 C22orf42Q6IC83 251 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 ZNF841Q6ZN19 808 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 LYPD6Q86Y78 171 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 FGFRL1Q8N441 504 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 OR10K1Q8NGX5 313 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 PHYHIPQ92561 330 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 EMG1Q92979 244 aaKnown RBP11□□□□□ -0.65
GTF3A-209ENST00000640289 C12orf43Q96C57 262 aaKnown RBP11□□□□□ -0.65
GTF3A-209ENST00000640289 NEIL1Q96FI4 390 aaPredicted RBP11□□□□□ -0.65
GTF3A-209ENST00000640289 CPNE2Q96FN4 548 aaPredicted RBP11□□□□□ -0.65
GTF3A-209ENST00000640289 GAFA1Q96PS6 74 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 GFI1Q99684 422 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 CNTD2Q9H8S5 307 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 OR14J1Q9UGF5 321 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 METRNQ9UJH8 293 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 ZNF222Q9UK12 451 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 STUB1Q9UNE7 303 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 CR1P17927 2039 aa11□□□□□ -0.65
GTF3A-209ENST00000640289 CREBBPQ92793 2442 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 RFPL4AA6NLU0 287 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 RFPL4AL1F8VTS6 287 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms