RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 OR51A2Q8NGJ7 313 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 VCX2Q9H322 139 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 METTL7AQ9H8H3 244 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 CDH20Q9HBT6 801 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 YAE1D1Q9NRH1 226 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 TMEM38BQ9NVV0 291 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 TBC1D29Q9UFV1 150 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 DHDHQ9UQ10 334 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 TMED7Q9Y3B3 224 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 ODAMA1E959 279 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 CLDN1O95832 211 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 SLURP2P0DP57 97 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 CTSEP14091 401 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 RHOQP17081 205 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 RND2P52198 227 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 GPM6BQ13491 265 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 ELAVL3Q14576 367 aaKnown RBP5.11□□□□□ -1.59
SCN1A-216ENST00000637968 SHBQ15464 509 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 PSG3Q16557 428 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 PLPP4Q5VZY2 271 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 TEX43Q6ZNM6 134 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 OOSP2Q86WS3 158 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 CADM4Q8NFZ8 388 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 OR8G5Q8NG78 346 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 OR52E2Q8NGJ4 325 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 OR1K1Q8NGR3 316 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 ASB10Q8WXI3 467 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 NICN1Q9BSH3 213 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 RNF126Q9BV68 326 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 Q9N2J8 555 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 PRSS21Q9Y6M0 314 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 ZNF780BQ9Y6R6 833 aa5.11□□□□□ -1.59
SCN1A-216ENST00000637968 FITM1A5D6W6 292 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 B4DGG1 531 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 IRAK2O43187 625 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ALOX12BO75342 701 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ZNF253O75346 499 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 HLA-DQA2P01906 255 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 KLK1P06870 262 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ERGP11308 486 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 SRPXP78539 464 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 LRRC10Q5BKY1 277 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 MS4A13Q5J8X5 152 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ZNF506Q5JVG8 444 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 FAM78BQ5VT40 261 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 HMGN2P46Q86SG4 172 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 FAM219AQ8IW50 185 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 OR1B1Q8NGR6 318 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 SLC25A43Q8WUT9 341 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 SUSD6Q92537 303 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 CITED2Q99967 270 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 SS18L2Q9UHA2 77 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 MIA3Q5JRA6 1907 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 SAP18O00422 153 aaKnown RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ST8SIA3O43173 380 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ZNF43P17038 809 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 PSMB3P49720 205 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ZNF136P52737 540 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 PCBP3P57721 371 aaKnown RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 CCL14Q16627 93 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 MORN2Q502X0 79 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 CTSL3PQ5NE16 218 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 SLC25A44Q96H78 314 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 TSPAN32Q96QS1 320 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 GBF1Q92538 1859 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 DBIP07108 87 aaKnown RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 TSPOP30536 169 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 HRH1P35367 487 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 CCR2P41597 374 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 GPM6AP51674 278 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 TGFBR3Q03167 851 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ACVR1Q04771 509 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 COX19Q49B96 90 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ZNF385BQ569K4 471 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 ADGRE4PQ86SQ3 457 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 SULF2Q8IWU5 870 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 MS4A4AQ96JQ5 239 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 MRPL13Q9BYD1 178 aaKnown RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 MARCH2Q9P0N8 246 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 PILRBQ9UKJ0 227 aa5.1□□□□□ -1.59
SCN1A-216ENST00000637968 YLPM1P49750 1951 aaKnown RBP5.1□□□□□ -1.59
SCN1A-216ENST00000637968 NSG1A0A0A6YYJ2 146 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 NRASP01111 189 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 KRASP01116 189 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 IL2RAP01589 272 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 F2RP25116 425 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 GRPRP30550 384 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 MDH2P40926 338 aaKnown RBP5.09□□□□□ -1.59
SCN1A-216ENST00000637968 C5orf64Q2M2E5 130 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 ZNF788Q6ZQV5 615 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 C1orf174Q8IYL3 243 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 LGI3Q8N145 548 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 RNF175Q8N4F7 328 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 LMX1AQ8TE12 382 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 ADAMTS15Q8TE58 950 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 PELI1Q96FA3 418 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 PGLYRP3Q96LB9 341 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 SLC5A6Q9Y289 635 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 COL24A1Q17RW2 1714 aa5.09□□□□□ -1.59
SCN1A-216ENST00000637968 PROB1E7EW31 1015 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms