RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 F5H5K5 113 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 KCNAB3O43448 404 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 LRP3O75074 770 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 PATE4P0C8F1 98 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 UBBP0CG47 229 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 UBCP0CG48 685 aaKnown RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 MSR1P21757 451 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 CDK2P24941 298 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 RPS27AP62979 156 aaKnown RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 UBA52P62987 128 aaKnown RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 HYAL4Q2M3T9 481 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 PLEKHN1Q494U1 663 aaPredicted RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 ZNF283Q8N7M2 679 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 OR4A4PQ8NGN8 299 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 FCAMRQ8WWV6 532 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 WFDC12Q8WWY7 111 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 TMEM231Q9H6L2 316 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 GPN1Q9HCN4 374 aaPredicted RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 CLEC5AQ9NY25 188 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 CKLFQ9UBR5 152 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 B4GALT7Q9UBV7 327 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 STEAP1Q9UHE8 339 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 FOXD3Q9UJU5 478 aaPredicted RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 DSPP15924 2871 aaKnown RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 RNF222A6NCQ9 220 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 SYT7O43581 403 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 ARG2P78540 354 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 ENDOGQ14249 297 aaKnown RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 TMEM244Q5VVB8 128 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 FAM57BQ71RH2 274 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 OR4C16Q8NGL9 310 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 THAP6Q8TBB0 222 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 NABP1Q96AH0 204 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 CPNE2Q96FN4 548 aaPredicted RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 DEFB127Q9H1M4 99 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 NELFAQ9H3P2 528 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 MGAQ8IWI9 3026 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 A0A1W2PN81 502 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 E9PLN8 166 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 TUBG1P23258 451 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 CHRNA7P36544 502 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 CX3CR1P49238 355 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 NOVA1P51513 510 aaKnown RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 GLYATL3Q5SZD4 288 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 IGF2-ASQ6U949 168 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 DNM1P46Q6ZS02 220 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 C20orf196Q8IYI0 205 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 JAGN1Q8N5M9 183 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 NEK7Q8TDX7 302 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 S100A16Q96FQ6 103 aaKnown RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 SEPSECSQ9HD40 501 aaKnown RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 TUBG2Q9NRH3 451 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 ASF1BQ9NVP2 202 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 CARHSP1Q9Y2V2 147 aaKnown RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 MRPS18CQ9Y3D5 142 aaKnown RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 CRYABP02511 175 aaKnown RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 ISG15P05161 165 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 DBHP09172 617 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 DDTP30046 118 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 LHX2P50458 406 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 RAB5BP61020 215 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 PDZK1IP1Q13113 114 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 PCGF3Q3KNV8 242 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 C2orf76Q3KRA6 126 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 C10orf128Q5T292 105 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 ABHD12BQ7Z5M8 362 aaPredicted RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 BIVMQ86UB2 503 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 ZNF546Q86UE3 836 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 OR8B12Q8NGG6 310 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 ADAT3Q96EY9 351 aaPredicted RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 MARS2Q96GW9 593 aaKnown RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 FAM71F1Q96KD3 344 aaPredicted RBP10.06□□□□□ -0.8
CLN6-217ENST00000636964 LRFN3Q9BTN0 628 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 PIGMQ9H3S5 423 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 FREM1Q5H8C1 2179 aa10.06□□□□□ -0.8
CLN6-217ENST00000636964 CBY3A6NI87 242 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 UBE2CO00762 179 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 CRHP06850 196 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 CALCBP10092 127 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 ZNF44P15621 663 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 ABOP16442 354 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 SLC6A9P48067 706 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 TMEM69Q5SWH9 247 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 TXN2Q99757 166 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 PIEZO2Q9H5I5 2752 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 C1orf196B1AJZ1 125 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 HPNP05981 417 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 ERCC1P07992 297 aaPredicted RBP10.05□□□□□ -0.8
CLN6-217ENST00000636964 SNRNP70P08621 437 aaKnown RBP10.05□□□□□ -0.8
CLN6-217ENST00000636964 PF4V1P10720 104 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 B4GALT1P15291 398 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 ZNF84P51523 738 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 RBX1P62877 108 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 MRPL49Q13405 166 aaKnown RBP10.05□□□□□ -0.8
CLN6-217ENST00000636964 C9orf135Q5VTT2 229 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 OR10K2Q6IF99 312 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 MCEMP1Q8IX19 187 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms