RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ADARB1P78563 741 aaKnown RBP12.97□□□□□ -0.33
LINC00339-207ENST00000634712 DGUOKQ16854 277 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 CALHM1Q8IU99 346 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 C8orf59Q8N0T1 100 aaPredicted RBP12.97□□□□□ -0.33
LINC00339-207ENST00000634712 BATF2Q8N1L9 274 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 ZNRF1Q8ND25 227 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 OR5AK2Q8NH90 309 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 ADAT3Q96EY9 351 aaPredicted RBP12.97□□□□□ -0.33
LINC00339-207ENST00000634712 DMRTB1Q96MA1 342 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 NRIP2Q9BQI9 281 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 DCTN5Q9BTE1 182 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 OR14J1Q9UGF5 321 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 KPTNQ9Y664 436 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 HSPE1-MOB4S4R3N1 261 aa12.97□□□□□ -0.33
LINC00339-207ENST00000634712 TRBV2A0A0J9YWF9 115 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 A0A1W2PQ09 198 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 TMEM212A6NML5 194 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 H0YAE9 185 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 INMTO95050 263 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 ATF1P18846 271 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 PRDX2P32119 198 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 MTCP1P56278 107 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 CAV3P56539 151 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 BAMBIQ13145 260 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 BRD3OSQ6XYD6 125 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 UTS2BQ765I0 119 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 MKXQ8IYA7 352 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 LY6G5BQ8NDX9 201 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 LHX4Q969G2 390 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 SDSLQ96GA7 329 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 CEP19Q96LK0 163 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 JAM3Q9BX67 310 aa12.96□□□□□ -0.33
LINC00339-207ENST00000634712 CAB39Q9Y376 341 aaPredicted RBP12.96□□□□□ -0.33
LINC00339-207ENST00000634712 ERICH4A6NGS2 130 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 LIMS3P0CW19 117 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 LIMS4P0CW20 117 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 MMP9P14780 707 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 AZGP1P25311 298 aaKnown RBP12.95□□□□□ -0.34
LINC00339-207ENST00000634712 ACTG1P63261 375 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 SLC34A1Q06495 639 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 BLMHQ13867 455 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 LHFPL2Q6ZUX7 228 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 C9orf139Q6ZV77 190 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 SLC25A26Q70HW3 274 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-207ENST00000634712 OR51A4Q8NGJ6 313 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 OR10AC1Q8NH08 325 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 FAM216AQ8WUB2 273 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 TSEN15Q8WW01 171 aaKnown RBP12.95□□□□□ -0.34
LINC00339-207ENST00000634712 GATAD2BQ8WXI9 593 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 ZDHHC16Q969W1 377 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 SLAMF9Q96A28 289 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 SPSB1Q96BD6 273 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 TMEM80Q96HE8 168 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 TBX15Q96SF7 602 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 ZNF649Q9BS31 505 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 SIRPDQ9H106 197 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 ZNF222Q9UK12 451 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 DHDHQ9UQ10 334 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 EXOSC1Q9Y3B2 195 aaKnown RBP12.95□□□□□ -0.34
LINC00339-207ENST00000634712 MAB21L2Q9Y586 359 aa12.95□□□□□ -0.34
LINC00339-207ENST00000634712 IGKV1-27A0A075B6S5 117 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 E9PI62 339 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 ZFPL1O95159 310 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 KNG1P01042 644 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 POU3F4P49335 361 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 ETV1P50549 477 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 RPL22L1Q6P5R6 122 aaKnown RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 FIP1L1Q6UN15 594 aaKnown RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 VMO1Q7Z5L0 202 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 SERPINA12Q8IW75 414 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 Q8IYB0 196 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 CD177Q8N6Q3 437 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 KIR3DL3Q8N743 410 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 ZDHHC22Q8N966 263 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 OR5D14Q8NGL3 314 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 C8orf46Q8TAG6 207 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 OPALINQ96PE5 141 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 PDCD1LG2Q9BQ51 273 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 ZCCHC4Q9H5U6 513 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 HES4Q9HCC6 221 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 MTCH1Q9NZJ7 389 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 DIMT1Q9UNQ2 313 aaKnown RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 TRBV23-1A0A0A0MS06 115 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 IGKV1-9A0A0C4DH69 117 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 CENPVL3A0A0U1RRI6 287 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 ERVK11-1P61568 191 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 UBA52P62987 128 aaKnown RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 CCDC58Q4VC31 144 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 FAM185AQ8N0U4 392 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 OR13C9Q8NGT0 318 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 GGHQ92820 318 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 GCDHQ92947 438 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 EMG1Q92979 244 aaKnown RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 ZNF48Q96MX3 618 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 DUX5Q96PT3 197 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms