RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 BLMHQ13867 455 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 CNN3Q15417 329 aaKnown RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 SMIM21Q3B7S5 101 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 KLHL22Q53GT1 634 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 DMRTC1Q5HYR2 192 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 KLF17Q5JT82 389 aaPredicted RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 ATPAF1Q5TC12 328 aaPredicted RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 TMEM244Q5VVB8 128 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 KRT74Q7RTS7 529 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 SSX6Q7RTT6 188 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 BCL6BQ8N143 479 aaPredicted RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 ACBD7Q8N6N7 88 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 FAM216BQ8N7L0 139 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 OR14K1Q8NGZ2 314 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 TRMT10AQ8TBZ6 339 aaKnown RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 HPSE2Q8WWQ2 592 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 AQP3Q92482 292 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 RORBQ92753 470 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 SLC25A28Q96A46 364 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 SEH1LQ96EE3 360 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 WDFY2Q96P53 400 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 WDR13Q9H1Z4 485 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 SMURF1Q9HCE7 757 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 SLC25A10Q9UBX3 287 aaPredicted RBP5.29□□□□□ -1.56
TCF4-249ENST00000625716 POLDIP2Q9Y2S7 368 aa5.29□□□□□ -1.56
TCF4-249ENST00000625716 A0A1B0GTI1 187 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 A0A1W2PPH5 198 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ANKRD61A6NGH8 418 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 H3BSH0 61 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 J3QT63 122 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 SLC1A7O00341 560 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 SLC16A6O15403 523 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 RHBDL1O75783 438 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 NXPH2O95156 264 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 CYB5AP00167 134 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 PLATP00750 562 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 SFTPBP07988 381 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 RPSAP08865 295 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 ACAA1P09110 424 aaPredicted RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 ZNF20P17024 532 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 CCL1P22362 96 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 PRTN3P24158 256 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 EEF1B2P24534 225 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 TGM4P49221 684 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 FUT6P51993 359 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ATP1B3P54709 279 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 UBA52P62987 128 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 ZNF85Q03923 595 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 RAB40BQ12829 278 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ZSCAN26Q16670 478 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 CDONQ4KMG0 1287 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 TMEM42Q69YG0 159 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 STUMQ69YW2 141 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 FIP1L1Q6UN15 594 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 BRD3OSQ6XYD6 125 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ZNF788Q6ZQV5 615 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 C9orf139Q6ZV77 190 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 C3orf56Q8N813 242 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 LINC00482Q8N8I6 264 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ZDHHC22Q8N966 263 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 POC1AQ8NBT0 407 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 TMEM185AQ8NFB2 350 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ANGPTL6Q8NI99 470 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 NPRL2Q8WTW4 380 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 LHX4Q969G2 390 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 C10orf35Q96D05 121 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 LGALS12Q96DT0 336 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 BORCS8Q96FH0 119 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 GAFA1Q96PS6 74 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 DUX5Q96PT3 197 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 MBOAT4Q96T53 435 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 SLC29A1Q99808 456 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 DCTN5Q9BTE1 182 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 NEK6Q9HC98 313 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 INPP5EQ9NRR6 644 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ACOXLQ9NUZ1 547 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 FAM118AQ9NWS6 357 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 SMPD3Q9NY59 655 aaPredicted RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 RPUSD1Q9UJJ7 312 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 EXOGQ9Y2C4 368 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 CAB39Q9Y376 341 aaPredicted RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 FAM96BQ9Y3D0 163 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 RPL36Q9Y3U8 105 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 KPTNQ9Y664 436 aa5.28□□□□□ -1.56
TCF4-249ENST00000625716 ANK3Q12955 4377 aaKnown RBP5.28□□□□□ -1.56
TCF4-249ENST00000625716 IGHV1-69DA0A0B4J2H0 117 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 CENPVL3A0A0U1RRI6 287 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 A0A1B0GW55 424 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 LOC107986453A0A1B0GWG9 222 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 hCG_1809904A0A1W2PP81 198 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 A0A1W2PPE2 198 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 A0A1W2PR64 198 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 A0A1W2PRV1 198 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 PQLC2LA1A4F0 135 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 IRGMA1A4Y4 181 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 H0YAE9 185 aa5.27□□□□□ -1.57
TCF4-249ENST00000625716 SIGLEC5O15389 551 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms