RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 NINJ1Q92982 152 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 PCDHB10Q9UN67 800 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 CBY1Q9Y3M2 126 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 PIGBOS1A0A0B4J2F0 54 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 JTBO76095 146 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SNAPINO95295 136 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 UMODP07911 640 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SLC25A4P12235 298 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 PRF1P14222 555 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 OMGP23515 440 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ARR3P36575 388 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SRPXP78539 464 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 RBM39Q14498 530 aaKnown RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF345Q14585 488 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 PRSS54Q6PEW0 395 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 DHRS13Q6UX07 377 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 HSD17B13Q7Z5P4 300 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF611Q8N823 705 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SUMF1Q8NBK3 374 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 OR56B2PQ8NGI1 322 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 IP6K3Q96PC2 410 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 TECTBQ96PL2 329 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 NMES1Q9C002 83 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 HEXA-AS1Q9H8Q6 139 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 LUZP4Q9P127 313 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF175Q9Y473 711 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 KIR2DS1A0A191URI9 304 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SHOXO15266 292 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZIC3O60481 467 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 CNOT4O95628 575 aaKnown RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 CCL2P13500 99 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 KIR2DS4P43632 304 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 B2MP61769 119 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 KIR2DS1Q14954 304 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SURF2Q15527 256 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 C10orf128Q5T292 105 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 DPPA2Q7Z7J5 298 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZDHHC23Q8IYP9 409 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 PAQR4Q8N4S7 273 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZSCAN4Q8NAM6 433 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 TMEM178AQ8NBL3 297 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 BVESQ8NE79 360 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 OCSTAMPQ9BR26 566 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 NUDT16L1Q9BRJ7 211 aaKnown RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 PBDC1Q9BVG4 233 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 OR2H1Q9GZK4 316 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 GPR35Q9HC97 309 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF319Q9P2F9 582 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 GPR132Q9UNW8 380 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SVILO95425 2214 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 LOC102723996A0A087X1L8 192 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 HS3ST1O14792 307 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 GEMIN2O14893 280 aaKnown RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 KCNAB3O43448 404 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 GPM6AP51674 278 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SSX2Q16385 188 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 KCNMB1Q16558 191 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 TUSC1Q2TAM9 212 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SNAI3Q3KNW1 292 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 HSD17B11Q8NBQ5 300 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 OR1S1Q8NH92 325 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 APOBEC3DQ96AK3 386 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 MRPS24Q96EL2 167 aaKnown RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 HDHD3Q9BSH5 251 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 SRXN1Q9BYN0 137 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 PARP12Q9H0J9 701 aaKnown RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 DNTTIP1Q9H147 329 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 MYOZ1Q9NP98 299 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 KCNIP1Q9NZI2 227 aa8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF629Q9UEG4 869 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-223ENST00000620507 EP300Q09472 2414 aaPredicted RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 ARGFXA6NJG6 315 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 PDCD6O75340 191 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF205O95201 554 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 IFNA5P01569 189 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 DUSP1P28562 367 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 MECP2P51608 486 aaKnown RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 ENDOGQ14249 297 aaKnown RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 RSPO4Q2I0M5 234 aaPredicted RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 PLAC9Q5JTB6 97 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF468Q5VIY5 522 aaPredicted RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 H3F3CQ6NXT2 135 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 RDH5Q92781 318 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 FBXO17Q96EF6 278 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 SULT4A1Q9BR01 284 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 SPACA1Q9HBV2 294 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 CNOT1A5YKK6 2376 aaKnown RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 ZNF732B4DXR9 585 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 PTGDSP41222 190 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 PSG4Q00888 419 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 C1QL2Q7Z5L3 287 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 SCGB1C1Q8TD33 95 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 TMEM231Q9H6L2 316 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 AK3Q9UIJ7 227 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 LHX6Q9UPM6 363 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 RANBP2P49792 3224 aaKnown RBP8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 LAMA3Q16787 3333 aa8.05□□□□□ -1.12
RBFOX1-223ENST00000620507 KLF7O75840 302 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms