RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 LILRB1Q8NHL6 650 aaPredicted RBP17.78■□□□□ 0.44
NEK3-208ENST00000618534 DYRK2Q92630 601 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 TMEM54Q969K7 222 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 SCRT1Q9BWW7 348 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 PLEK2Q9NYT0 353 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 NSG2Q9Y328 171 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 ZNF850A8MQ14 1090 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 NR2C1P13056 603 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 ZNF44P15621 663 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 HMGN3Q15651 99 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 GUK1Q16774 197 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 PLXDC2Q6UX71 529 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 DEFB126Q9BYW3 111 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 NAA60Q9H7X0 242 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 NXT1Q9UKK6 140 aaKnown RBP17.78■□□□□ 0.44
NEK3-208ENST00000618534 EDARQ9UNE0 448 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 MTCH2Q9Y6C9 303 aa17.78■□□□□ 0.44
NEK3-208ENST00000618534 CHCHD2Q9Y6H1 151 aaPredicted RBP17.78■□□□□ 0.44
NEK3-208ENST00000618534 WDR87Q6ZQQ6 2873 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 CEP192Q8TEP8 1941 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 GLAP06280 429 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 CD63P08962 238 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 DANCRP0C864 163 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 ZNF728P0DKX0 622 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 GLI4P10075 376 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 ACKR3P25106 362 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 PRSS12P56730 875 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 FXYD4P59646 89 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 HIST1H3AP68431 136 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 H3F3AP84243 136 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 HIST2H3PS2Q5TEC6 136 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 FOXL2NBQ6ZUU3 175 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 HIST2H3AQ71DI3 136 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 LYZL2Q7Z4W2 148 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 C20orf196Q8IYI0 205 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 TMEM156Q8N614 296 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 OR2AE1Q8NHA4 323 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 ISOC2Q96AB3 205 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 SGK3Q96BR1 496 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 MARS2Q96GW9 593 aaKnown RBP17.77■□□□□ 0.44
NEK3-208ENST00000618534 IP6K3Q96PC2 410 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 UCN2Q96RP3 112 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 NECAP2Q9NVZ3 263 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 KCNIP3Q9Y2W7 256 aa17.77■□□□□ 0.44
NEK3-208ENST00000618534 FAM230AA0A1W2PPH8 454 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 C7orf77A4D0Y5 90 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 C1QL1O75973 258 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 ABCA11PQ4W5N1 156 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 RBMS3Q6XE24 437 aaKnown RBP17.77■□□□□ 0.43
NEK3-208ENST00000618534 RTN4IP1Q8WWV3 396 aaPredicted RBP17.77■□□□□ 0.43
NEK3-208ENST00000618534 C20orf24Q9BUV8 137 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 METTL9Q9H1A3 318 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 PCED1AQ9H1Q7 454 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 RGCCQ9H4X1 137 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 SPACA1Q9HBV2 294 aa17.77■□□□□ 0.43
NEK3-208ENST00000618534 C5orf52A6NGY3 159 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 DHHO43323 396 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 SEC11BP0C7V7 166 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 SRFP11831 508 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 DAOP14920 347 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 RSU1Q15404 277 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 PHLDA2Q53GA4 152 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 NANPQ8TBE9 248 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 FBXO17Q96EF6 278 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 SH3BGRL3Q9H299 93 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 ZDHHC8Q9ULC8 765 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 IGKV1-27A0A075B6S5 117 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 A6NLC8 198 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 PNLIPP16233 465 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 CAMLGP49069 296 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 BRICD5Q6PL45 260 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.76■□□□□ 0.43
NEK3-208ENST00000618534 C10orf35Q96D05 121 aa17.76■□□□□ 0.43
NEK3-208ENST00000618534 ZNF837Q96EG3 531 aaPredicted RBP17.76■□□□□ 0.43
NEK3-208ENST00000618534 EIF5A2Q9GZV4 153 aaKnown RBP17.76■□□□□ 0.43
NEK3-208ENST00000618534 BORCS7-ASMTA0A0B4J1R7 106 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 A0A1W2PPE3 182 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 M0R036 132 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 P2RY1P47900 373 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 UCP2P55851 309 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 EIF2S3LQ2VIR3 472 aaKnown RBP17.75■□□□□ 0.43
NEK3-208ENST00000618534 ZNF385CQ66K41 422 aaPredicted RBP17.75■□□□□ 0.43
NEK3-208ENST00000618534 SLC16A13Q7RTY0 426 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 TMEM123Q8N131 208 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 SPTSSAQ969W0 71 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 REEP6Q96HR9 211 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 GINS3Q9BRX5 216 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 LUZP4Q9P127 313 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 CFAP54Q96N23 3096 aa17.75■□□□□ 0.43
NEK3-208ENST00000618534 A0A1W2PPH5 198 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 FAM221AA4D161 298 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 NPIPA2E9PIF3 369 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 NPIPA3F8WFD2 350 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 GPR137BO60478 399 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 MT-ND4LP03901 98 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 SHBQ15464 509 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 RNF212Q495C1 297 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 COMMD1Q8N668 190 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 NAXEQ8NCW5 288 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 OR52M1Q8NGK5 317 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms