RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 IL21Q9HBE4 155 aa9.15□□□□□ -0.95
CUL4A-212ENST00000617546 ZIC2O95409 532 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 PGA4P0DJD7 388 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 PGA5P0DJD9 388 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 PRF1P14222 555 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 HOXA6P31267 233 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 EWSR1Q01844 656 aaKnown RBP eCLIP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 ELOBQ15370 118 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 SLC37A2Q8TED4 501 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 ZNF552Q9H707 407 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 UBE2ZQ9H832 354 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 ZNF729A6NN14 1252 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 RPS27P42677 84 aaKnown RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 KIR2DS2P43631 304 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 CDC34P49427 236 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 MMP16P51512 607 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 SERF2P84101 59 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 MYPOPQ86VE0 399 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 SPACA5Q96QH8 159 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 TMEM191AQ9H0A3 160 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 TBX21Q9UL17 535 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 GUSBP08236 651 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 GPR12P47775 334 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 ASCL1P50553 236 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 LRP11Q86VZ4 500 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 APH1AQ96BI3 265 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 MRPL38Q96DV4 380 aaKnown RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 PGLYRP3Q96LB9 341 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 MRPL22Q9NWU5 206 aaKnown RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 STARD10Q9Y365 291 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 ALG1L2C9J202 215 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 TOX3O15405 576 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 TM4SF4P48230 202 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 AGFG1P52594 562 aaKnown RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 FAM78BQ5VT40 261 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 BTNL3Q6UXE8 466 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 DEFB119Q8N690 84 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.14□□□□□ -0.95
CUL4A-212ENST00000617546 HIST1H2BAQ96A08 127 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 VN1R1Q9GZP7 353 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 DOCK1Q14185 1865 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 DYNLT3P51808 116 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 DCAF12L2Q5VW00 463 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 ZNF600Q6ZNG1 722 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 RNF186Q9NXI6 227 aa9.14□□□□□ -0.95
CUL4A-212ENST00000617546 LOC102723971A0A1B0GUV8 181 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 TRDCB7Z8K6 153 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 OPN1LWP04000 364 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 CD99P14209 185 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 PMCHP20382 165 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 RHOBP62745 196 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 HLA-DRB5Q30154 266 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 OR4B1Q8NGF8 309 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 OR10G8Q8NGN5 311 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 GPX7Q96SL4 187 aaPredicted RBP9.13□□□□□ -0.95
CUL4A-212ENST00000617546 A0A1B0GU03 582 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 IDSB3KWA1 339 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 LINC01387J3KSC0 135 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 PLPP3O14495 311 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 TIMM8AO60220 97 aaPredicted RBP9.13□□□□□ -0.95
CUL4A-212ENST00000617546 ONECUT2O95948 504 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 HAAOP46952 286 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 YBX1P67809 324 aaKnown RBP9.13□□□□□ -0.95
CUL4A-212ENST00000617546 ATG4DQ86TL0 474 aaPredicted RBP9.13□□□□□ -0.95
CUL4A-212ENST00000617546 ASB5Q8WWX0 329 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 ESRP2Q9H6T0 727 aaKnown RBP9.13□□□□□ -0.95
CUL4A-212ENST00000617546 M0R1X1 148 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 CSN1S1P47710 185 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 CLN3Q13286 438 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 TMEM211Q6ICI0 200 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 FAM122AQ96E09 287 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 COX14Q96I36 57 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 TMEM167BQ9NRX6 74 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 MED29Q9NX70 200 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 STRCQ7RTU9 1775 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 NKX6-3A6NJ46 265 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 HS3ST1O14792 307 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 WDR1O75083 606 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 HEXAP06865 529 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 IGFBP6P24592 240 aaPredicted RBP9.13□□□□□ -0.95
CUL4A-212ENST00000617546 CAPZBP47756 277 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 ERHP84090 104 aaKnown RBP9.13□□□□□ -0.95
CUL4A-212ENST00000617546 CDKN3Q16667 212 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 MICBQ29980 383 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 ZNF343Q6P1L6 599 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 CARFQ8N187 725 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 OR1F12Q8NHA8 337 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 FGF21Q9NSA1 209 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 SLX4Q8IY92 1834 aa9.13□□□□□ -0.95
CUL4A-212ENST00000617546 TRBV5-7A0A0A0MS05 114 aa9.12□□□□□ -0.95
CUL4A-212ENST00000617546 LILRA5A6NI73 299 aa9.12□□□□□ -0.95
CUL4A-212ENST00000617546 MT-ND6P03923 174 aa9.12□□□□□ -0.95
CUL4A-212ENST00000617546 CD74P04233 296 aa9.12□□□□□ -0.95
CUL4A-212ENST00000617546 GNG4P50150 75 aa9.12□□□□□ -0.95
CUL4A-212ENST00000617546 POLR2GP62487 172 aaKnown RBP eCLIP9.12□□□□□ -0.95
CUL4A-212ENST00000617546 GVQW1Q8N7I0 195 aa9.12□□□□□ -0.95
CUL4A-212ENST00000617546 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms