RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 A0A1W2PR64 198 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 A0A1W2PRV1 198 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 M0R129 80 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 DLGAP1O14490 977 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 VSIG10L2P0DP72 767 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 PIPP12273 146 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 PLA1AQ53H76 456 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 BCL2L15Q5TBC7 163 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 CALHM1Q8IU99 346 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 ELMOD2Q8IZ81 293 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 DYNAPQ8N1N2 210 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 OR14K1Q8NGZ2 314 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 DNAJC9Q8WXX5 260 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 NKX3-1Q99801 234 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 OR52A1Q9UKL2 312 aa16.82■□□□□ 0.28
TRAPPC3-208ENST00000616074 DNAH3Q8TD57 4116 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 TCRBV3S1A0A5B6 114 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 FAM90A8PA6NJQ4 464 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 MPZP25189 248 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 DAPP51397 102 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 DLX6P56179 175 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 SAMD5Q5TGI4 173 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 FAHD1Q6P587 224 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 MEPCEQ7L2J0 689 aaKnown RBP16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 ANGPTL5Q86XS5 388 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 SLC35F2Q8IXU6 374 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 ZNF702PQ9H963 129 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 ADGRL4Q9HBW9 690 aa16.81■□□□□ 0.28
TRAPPC3-208ENST00000616074 C17orf98A8MV24 154 aa16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 VGLL3A8MV65 326 aa16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 RAB13P51153 203 aa16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 ERVK11-1P61568 191 aa16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 HABP2Q14520 560 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 KPRPQ5T749 579 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 Q6ZSR3 168 aa16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 LYG1Q8N1E2 194 aa16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 NRBF2Q96F24 287 aa16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 MRM2Q9UI43 246 aaKnown RBP16.8■□□□□ 0.28
TRAPPC3-208ENST00000616074 MEX3AA1L020 520 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 K7N7A8 449 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 COL10A1Q03692 680 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 AADACL4Q5VUY2 407 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 CCBE1Q6UXH8 406 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 TCEANCQ8N8B7 351 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 ASCC1Q8N9N2 400 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 TRMT10AQ8TBZ6 339 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 MNTQ99583 582 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 PRRG3Q9BZD7 231 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 PKIBQ9C010 78 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 SERTAD4Q9NUC0 356 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 CLN6Q9NWW5 311 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 SLC22A13Q9Y226 551 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 TCF19Q9Y242 345 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 SNX5Q9Y5X3 404 aa16.79■□□□□ 0.28
TRAPPC3-208ENST00000616074 DHRS7CA6NNS2 312 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 ODF3BA8MYP8 253 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 ZNF670-ZNF695F2Z2N8 137 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 MITFO75030 526 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 PRB2P02812 416 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 ARG1P05089 322 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 ACTR3P61158 418 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 EFNB1P98172 346 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 IL24Q13007 206 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 FAM189A2Q15884 450 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 LDLRAD2Q5SZI1 272 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 NXNL2Q5VZ03 156 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 TMEM163Q8TC26 289 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 H2AFY2Q9P0M6 372 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 POMPQ9Y244 141 aa16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 TBL2Q9Y4P3 447 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-208ENST00000616074 FAM230AA0A1W2PPH8 454 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 F8VVB4 439 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 F8VWA3 439 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 GYG2O15488 501 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 ZNF737O75373 536 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 FBXO24O75426 580 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 CCL1P22362 96 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 EPHA2P29317 976 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 ODF4Q2M2E3 257 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 NSUN5P1Q3KNT7 163 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 DNAL1Q4LDG9 190 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 SLX4IPQ5VYV7 408 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 ZNF626Q68DY1 528 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 SSX6Q7RTT6 188 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 TMEM219Q86XT9 240 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 Q8N2B8 174 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 DTX3Q8N9I9 347 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 OR13D1Q8NGV5 346 aa16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 UTP4Q969X6 686 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 FOXRED1Q96CU9 486 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-208ENST00000616074 A6NDX4 124 aa16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 H3BSH0 61 aa16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 RPP14O95059 124 aaKnown RBP16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 ZNF728P0DKX0 622 aa16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 CD28P10747 220 aa16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 EDDM3BP56851 147 aa16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 SSX2Q16385 188 aa16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 C12orf73Q69YU5 71 aa16.76■□□□□ 0.27
TRAPPC3-208ENST00000616074 TCF23Q7RTU1 214 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms