RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 NR2C2APQ86WQ0 139 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 SPICQ8N5J4 248 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 VOPP1Q96AW1 172 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 CLDN23Q96B33 292 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 IP6K3Q96PC2 410 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 OR5B12Q96R08 314 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 LHFPL6Q9Y693 200 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 TRAV39A0A0B4J263 110 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 CBR1P16152 277 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 HNF1AP20823 631 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 MSMO1Q15800 293 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 SPANXN5Q5MJ07 72 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 FBXO7Q9Y3I1 522 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 MPPED1O15442 326 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 ADAM20O43506 726 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 SULT1A3P0DMM9 295 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 SULT1A4P0DMN0 295 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 RNPS1Q15287 305 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 CDCP2Q5VXM1 449 aa7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 RGP1Q92546 391 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 RBMXL1Q96E39 390 aaKnown RBP7.84□□□□□ -1.15
PDLIM5-222ENST00000615540 KIR2DS1A0A191URI9 304 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 LEUTXA8MZ59 168 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 KRBOX1C9JBD0 128 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 CST2P09228 141 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 KIR2DS4P43632 304 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 SRPXP78539 464 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 CFHR1Q03591 330 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 KIR2DS1Q14954 304 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 DCAF10Q5QP82 559 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 H2BFWTQ7Z2G1 175 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 ZDHHC22Q8N966 263 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 RPS4Y2Q8TD47 263 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 FAM206AQ9NX38 181 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 PCDHB10Q9UN67 800 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 HS3ST3B1Q9Y662 390 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 PRR32B1ATL7 298 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 IL2RAP01589 272 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 IGLV3-19P01714 112 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 CLPSP04118 112 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 TBPP20226 339 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 CEACAM6P40199 344 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 PPP1CBP62140 327 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 CLEC18BQ6UXF7 455 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 APCDD1LQ8NCL9 501 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 BPIFCQ8NFQ6 507 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 GHRLQ9UBU3 117 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 AQP7O14520 342 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 OR8U8P0C7N1 319 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 SP9P0CG40 484 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 ADRA2CP18825 462 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 UBE2KP61086 200 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM255AQ5JRV8 349 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 LINC00114Q6XXX2 140 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 LRRC75AQ8NAA5 344 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 SARAFQ96BY9 339 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 NARFLQ9H6Q4 476 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF71Q9NQZ8 489 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 CYB5R1Q9UHQ9 305 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 ASCC3Q8N3C0 2202 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 PRUNE2Q8WUY3 3088 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 IGKV3D-11A0A0A0MRZ8 115 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 ST8SIA3O43173 380 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 FGF5P12034 268 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 SPSB1Q96BD6 273 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 COL4A3Q01955 1670 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 C1orf196B1AJZ1 125 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 FUT3P21217 361 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 GNB1P62873 340 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 TAGLNQ01995 201 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 WDSUB1Q8N9V3 476 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 PLEKHF2Q9H8W4 249 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 POLDIP2Q9Y2S7 368 aa7.83□□□□□ -1.16
PDLIM5-222ENST00000615540 ALDH3B1P43353 468 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 SUCLG1P53597 346 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 GGNBP1Q5YKI7 109 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 RGS7BPQ6MZT1 257 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM88Q6PEY1 159 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 SPSB2Q99619 263 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 ANGPTL4Q9BY76 406 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TP53TG5Q9Y2B4 290 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 NINQ8N4C6 2090 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 RANBP2P49792 3224 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 C3orf85A0A1B0GTC6 90 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 NKX6-3A6NJ46 265 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF17P17021 662 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 GPR12P47775 334 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 PSG4Q00888 419 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 OR5AP2Q8NGF4 316 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 OPA3Q9H6K4 179 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 URGCP-MRPS24S4R325 110 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TRBV5-7A0A0A0MS05 114 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 A0A1W2PPV4 95 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 RFPL3SP0C7P2 107 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 LSM6P62312 80 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 RBPJQ06330 500 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 FAM185AQ8N0U4 392 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 POC1BQ8TC44 478 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms