RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 NDUFB3O43676 98 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 NOS1APO75052 506 aaPredicted RBP13.83□□□□□ -0.19
CBWD3-211ENST00000615061 NXPH2O95156 264 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 IGHV4-38-2P0DP08 117 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 FGF12P61328 243 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 ERVK11-1P61568 191 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 IL24Q13007 206 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 RPL22L1Q6P5R6 122 aaKnown RBP13.83□□□□□ -0.19
CBWD3-211ENST00000615061 IZUMO2Q6UXV1 221 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 SLC25A26Q70HW3 274 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 CD177Q8N6Q3 437 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 RPS4Y2Q8TD47 263 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 SGCDQ92629 289 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 RFT1Q96AA3 541 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 DNTTIP1Q9H147 329 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 ELL3Q9HB65 397 aaPredicted RBP13.83□□□□□ -0.19
CBWD3-211ENST00000615061 HES4Q9HCC6 221 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 CHCHD3Q9NX63 227 aaKnown RBP13.83□□□□□ -0.19
CBWD3-211ENST00000615061 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 ATP6V1G2O95670 118 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 SFTPBP07988 381 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 ACAA1P09110 424 aaPredicted RBP13.83□□□□□ -0.2
CBWD3-211ENST00000615061 SOX2P48431 317 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 RBP2P50120 134 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 MTCP1P56278 107 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 IL13RA1P78552 427 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 SMIM21Q3B7S5 101 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 CCDC58Q4VC31 144 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 C6orf141Q5SZD1 244 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 STX19Q8N4C7 294 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 TEX29Q8N6K0 151 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 OR13C5Q8NGS8 318 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 OR52N1Q8NH53 320 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 TSEN15Q8WW01 171 aaKnown RBP13.83□□□□□ -0.2
CBWD3-211ENST00000615061 OPALINQ96PE5 141 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 SLC6A7Q99884 636 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 FKBP14Q9NWM8 211 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 RASL12Q9NYN1 266 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 RPUSD1Q9UJJ7 312 aaKnown RBP13.83□□□□□ -0.2
CBWD3-211ENST00000615061 DHDHQ9UQ10 334 aa13.83□□□□□ -0.2
CBWD3-211ENST00000615061 SOX21Q9Y651 276 aaPredicted RBP13.83□□□□□ -0.2
CBWD3-211ENST00000615061 TRAV40A0A0B4J280 105 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 SLC1A7O00341 560 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 SPRY1O43609 319 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-211ENST00000615061 POU3F4P49335 361 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 LRRC10Q5BKY1 277 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 ASPHD2Q6ICH7 369 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 CRIP3Q6Q6R5 217 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 DNAAF1Q8NEP3 725 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 HAVCR2Q8TDQ0 301 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 UPRTQ96BW1 309 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 PCGF1Q9BSM1 259 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 IL36RNQ9UBH0 155 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 SLC25A10Q9UBX3 287 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-211ENST00000615061 ZNF69Q9UC07 566 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 OR14J1Q9UGF5 321 aa13.82□□□□□ -0.2
CBWD3-211ENST00000615061 DSCAML1Q8TD84 2053 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PNMA8CA0A1B0GUJ8 204 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 ZNF879B4DU55 563 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PTGES3LE9PB15 166 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 OGG1O15527 345 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 MMP9P14780 707 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 NPBWR2P48146 333 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 ATP1B3P54709 279 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 ARF6P62330 175 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 BCL6BQ8N143 479 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PARP16Q8N5Y8 322 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 TMEM185AQ8NFB2 350 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 OR5D18Q8NGL1 313 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 H1FXQ92522 213 aaKnown RBP13.81□□□□□ -0.2
CBWD3-211ENST00000615061 SMIM19Q96E16 107 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 SDSLQ96GA7 329 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 MED30Q96HR3 178 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 CEP19Q96LK0 163 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 ZCCHC4Q9H5U6 513 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PAK1IP1Q9NWT1 392 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-211ENST00000615061 NUP50Q9UKX7 468 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 TENM1Q9UKZ4 2725 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 TCF21O43680 179 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 ECDO95905 644 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-211ENST00000615061 OCM2P0CE71 109 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 OCMP0CE72 109 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 CALCBP10092 127 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 NDUFB7P17568 137 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PRKACBP22694 351 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 MYF6P23409 242 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PRDX2P32119 198 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 MED21Q13503 144 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 RIPK1Q13546 671 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 KRTAP24-1Q3LI83 254 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 LHFPL2Q6ZUX7 228 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 SERPINA12Q8IW75 414 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PNLDC1Q8NA58 520 aaKnown RBP13.81□□□□□ -0.2
CBWD3-211ENST00000615061 OR51A2Q8NGJ7 313 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 SPSB1Q96BD6 273 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 ORAI1Q96D31 301 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 DCTN5Q9BTE1 182 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 ANKRD60Q9BZ19 345 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms