RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 ONECUT2O95948 504 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 NGFRP08138 427 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 ROM1Q03395 351 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 MESP2Q0VG99 397 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 SRSF5Q13243 272 aaKnown RBP9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 PRAMEF5Q5TYX0 476 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 PRAMEF6Q5VXH4 476 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 ZNF321PQ8N8H1 164 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 OR5C1Q8NGR4 320 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 OR2A7Q96R45 310 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 NPDC1Q9NQX5 325 aaPredicted RBP9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 CCDC88CQ9P219 2028 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 F6UZH7 168 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 LINC01387J3KSC0 135 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 SMIM10L1P0DMW3 83 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 RRADP55042 308 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 MOB1BQ7L9L4 216 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 OR5AS1Q8N127 324 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 OR11L1Q8NGX0 322 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 SMIM10Q96HG1 83 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 ZNF251Q9BRH9 671 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 CACFD1Q9UGQ2 172 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 AP4M1O00189 453 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 ADAM20O43506 726 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 SMAD4Q13485 552 aaKnown RBP9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 C9orf50Q5SZB4 431 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 LANCL2Q9NS86 450 aa9.67□□□□□ -0.86
CDC42EP3-206ENST00000611976 CLEC18AA5D8T8 446 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 FAM166BA8MTA8 275 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 CLDN34H7C241 214 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 VAX1Q5SQQ9 334 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 NECAP1Q8NC96 275 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 CLEC18CQ8NCF0 446 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 ROBO4Q8WZ75 1007 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 OSGIN2Q9Y236 505 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 A0A096LPE4 126 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 A0A1W2PPZ6 126 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 HPP00738 406 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 ZP4Q12836 540 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 C4orf17Q53FE4 359 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 Q5BKY6 102 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 HOGA1Q86XE5 327 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 SPEM1Q8N4L4 309 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 CLDN23Q96B33 292 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 TAAR6Q96RI8 345 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 WDR90Q96KV7 1748 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 MBPP02686 304 aaPredicted RBP9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 EDN3P14138 238 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 TRIM61Q5EBN2 209 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 FAM109BQ6ICB4 259 aaPredicted RBP9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 CORO2AQ92828 525 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 MUCL1Q96DR8 90 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 TRAV20A0A0B4J274 112 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 OR5H15A6NDH6 313 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 FAM24AA6NFZ4 105 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 EFSO43281 561 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 GPM6AP51674 278 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 RHBDD2Q6NTF9 364 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 BTNL8Q6UX41 500 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 LIAT1Q6ZQX7 453 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 ABHD5Q8WTS1 349 aa9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 RYDENQ9NUL5 291 aaKnown RBP9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 YBX2Q9Y2T7 364 aaKnown RBP9.66□□□□□ -0.86
CDC42EP3-206ENST00000611976 OTOFQ9HC10 1997 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 A0A0G2JK05 382 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 A0A1W2PPH5 198 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 RBFOX3A6NFN3 312 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 H3BP45 60 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 TOX3O15405 576 aaPredicted RBP9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 INSM1Q01101 510 aaPredicted RBP9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 ADAT3Q96EY9 351 aaPredicted RBP9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 DICER1Q9UPY3 1922 aaKnown RBP9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 SEC11BP0C7V7 166 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 ZBTB25P24278 435 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 C1orf100Q5SVJ3 147 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 ZNF774Q6NX45 483 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 ZNF574Q6ZN55 896 aaPredicted RBP9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 C20orf196Q8IYI0 205 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 ZNF721Q8TF20 911 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 ERGIC1Q969X5 290 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 CTHRC1Q96CG8 243 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 SOSTQ9BQB4 213 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 PRR13Q9NZ81 148 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 C20orf202A1L168 122 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 CYTIPO60759 359 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 THY1P04216 161 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 ISG15P05161 165 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 CRYBA1P05813 215 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 H2BFSP57053 126 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 NXPH1P58417 271 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 CCL7P80098 99 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 IL24Q13007 206 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 OR8B8Q15620 311 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 CLEC9AQ6UXN8 241 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 C9orf40Q8IXQ3 194 aa9.65□□□□□ -0.86
CDC42EP3-206ENST00000611976 Q8IYB0 196 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms