RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 OPALINQ96PE5 141 aa11.85□□□□□ -0.51
HDDC2-209ENST00000609477 CLEC2DQ9UHP7 191 aa11.85□□□□□ -0.51
HDDC2-209ENST00000609477 ERGIC3Q9Y282 383 aa11.85□□□□□ -0.51
HDDC2-209ENST00000609477 ZNF281Q9Y2X9 895 aa11.85□□□□□ -0.51
HDDC2-209ENST00000609477 TPRKBQ9Y3C4 175 aa11.85□□□□□ -0.51
HDDC2-209ENST00000609477 PCDHGB5Q9Y5G0 923 aa11.85□□□□□ -0.51
HDDC2-209ENST00000609477 IGKV1-9A0A0C4DH69 117 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 SLC1A7O00341 560 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 MYL12BO14950 172 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 SYNGR1O43759 233 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 KNG1P01042 644 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 AMY2BP19961 511 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 FPR2P25090 351 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 GTF2A1P52655 376 aaPredicted RBP11.84□□□□□ -0.51
HDDC2-209ENST00000609477 WNT4P56705 351 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 BDH1Q02338 343 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 YIF1BQ5BJH7 314 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 ARMCX4Q5H9R4 360 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 DMKNQ6E0U4 476 aaPredicted RBP11.84□□□□□ -0.51
HDDC2-209ENST00000609477 USP43Q70EL4 1123 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 ANGPTL5Q86XS5 388 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 ZNF561Q8N587 486 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 OR5T2Q8NGG2 359 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 OR10AC1Q8NH08 325 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 C8orf46Q8TAG6 207 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 TSEN15Q8WW01 171 aaKnown RBP11.84□□□□□ -0.51
HDDC2-209ENST00000609477 GATAD2BQ8WXI9 593 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 ST8SIA4Q92187 359 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 THRSPQ92748 146 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 SEH1LQ96EE3 360 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 CEP19Q96LK0 163 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 GAFA1Q96PS6 74 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 CDCA4Q9BXL8 241 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 SMURF1Q9HCE7 757 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 SNTG1Q9NSN8 517 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 RPUSD1Q9UJJ7 312 aaKnown RBP11.84□□□□□ -0.51
HDDC2-209ENST00000609477 ZNF222Q9UK12 451 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 NUP50Q9UKX7 468 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 RAB26Q9ULW5 256 aa11.84□□□□□ -0.51
HDDC2-209ENST00000609477 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 IGKV1-27A0A075B6S5 117 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 C22orf46C9J442 243 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 TCF21O43680 179 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 SULT1B1O43704 296 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 CDK1P06493 297 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 EPHA1P21709 976 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 C21orf33P30042 268 aaPredicted RBP11.83□□□□□ -0.52
HDDC2-209ENST00000609477 VHLP40337 213 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 GABRA2P47869 451 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 GMFBP60983 142 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 ACSM1Q08AH1 577 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 ZNF529Q6P280 563 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 FIP1L1Q6UN15 594 aaKnown RBP11.83□□□□□ -0.52
HDDC2-209ENST00000609477 IZUMO2Q6UXV1 221 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 SAXO1Q8IYX7 474 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 NANOGP1Q8N7R0 232 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 TBC1D15Q8TC07 691 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 ZNF418Q8TF45 676 aaPredicted RBP11.83□□□□□ -0.52
HDDC2-209ENST00000609477 NPRL2Q8WTW4 380 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 FAM234AQ9H0X4 552 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 RASSF4Q9H2L5 321 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 CNTD2Q9H8S5 307 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 MTCH1Q9NZJ7 389 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 SLC25A10Q9UBX3 287 aaPredicted RBP11.83□□□□□ -0.52
HDDC2-209ENST00000609477 KPTNQ9Y664 436 aa11.83□□□□□ -0.52
HDDC2-209ENST00000609477 TRBV23-1A0A0A0MS06 115 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 RFPL4AA6NLU0 287 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 RFPL4AL1F8VTS6 287 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 MAGEB3O15480 346 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 RAB3AP20336 220 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 PRDX2P32119 198 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 SLC35A2P78381 396 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 PDZK1IP1Q13113 114 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 METTL11BQ5VVY1 283 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 XAF1Q6GPH4 301 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 C1orf122Q6ZSJ8 110 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 KIR3DL3Q8N743 410 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 ZSCAN4Q8NAM6 433 aaPredicted RBP11.82□□□□□ -0.52
HDDC2-209ENST00000609477 OR13C9Q8NGT0 318 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 GHSRQ92847 366 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 TMEM106AQ96A25 262 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 JMJD8Q96S16 334 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 DCTN5Q9BTE1 182 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 MND1Q9BWT6 205 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 DUSP21Q9H596 190 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 MAB21L2Q9Y586 359 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 CUBNO60494 3623 aa11.82□□□□□ -0.52
HDDC2-209ENST00000609477 PTGES3LE9PB15 166 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 FCN3O75636 299 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 LALBAP00709 142 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 ALDOBP05062 364 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 CHRM2P08172 466 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 IKZF1Q13422 519 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 PDCD1Q15116 288 aa11.81□□□□□ -0.52
HDDC2-209ENST00000609477 KISS1Q15726 138 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms