RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 GLCCI1Q86VQ1 547 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 MFSD4AQ8N468 514 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 OR2Z1Q8NG97 314 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 ZNF671Q8TAW3 534 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 TRMT10AQ8TBZ6 339 aaKnown RBP9.7□□□□□ -0.86
LINC00539-204ENST00000608957 LGALS14Q8TCE9 139 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 ITFG2Q969R8 447 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 TMEM186Q96B77 213 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 DIRC2Q96SL1 478 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 MRI1Q9BV20 369 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
LINC00539-204ENST00000608957 WDR12Q9GZL7 423 aaKnown RBP9.7□□□□□ -0.86
LINC00539-204ENST00000608957 MIXL1Q9H2W2 232 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 PLGRKTQ9HBL7 147 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 HMG20AQ9NP66 347 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 ABCB9Q9NP78 766 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 TMEM138Q9NPI0 162 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 TUBG2Q9NRH3 451 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 HIF1ANQ9NWT6 349 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 ADAM30Q9UKF2 790 aa9.7□□□□□ -0.86
LINC00539-204ENST00000608957 A0A0B4J203 849 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 ZNF816-ZNF321PA0A0X1KG74 233 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 RNF212BA8MTL3 300 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 IQCF6A8MYZ5 107 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 HPGDSO60760 199 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 ALX3O95076 343 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 HCKP08631 526 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 CALCBP10092 127 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
LINC00539-204ENST00000608957 ETV6P41212 452 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 SCAND1P57086 179 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 ZNF846Q147U1 533 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 CNN3Q15417 329 aaKnown RBP9.69□□□□□ -0.86
LINC00539-204ENST00000608957 RAB11BQ15907 218 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 KRTAP24-1Q3LI83 254 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 TMEM42Q69YG0 159 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 OR8G5Q8NG78 346 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 OR10AD1Q8NGE0 317 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 OR56B2PQ8NGI1 322 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 OR52N4Q8NGI2 321 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 OR6M1Q8NGM8 313 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 FOXRED1Q96CU9 486 aaPredicted RBP9.69□□□□□ -0.86
LINC00539-204ENST00000608957 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 EGLN1Q9GZT9 426 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 METTL17Q9H7H0 456 aaPredicted RBP9.69□□□□□ -0.86
LINC00539-204ENST00000608957 LIN7BQ9HAP6 207 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 TMEM106BQ9NUM4 274 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 STEAP1Q9UHE8 339 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 NPTNQ9Y639 398 aa9.69□□□□□ -0.86
LINC00539-204ENST00000608957 IGKV1-9A0A0C4DH69 117 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 A0A1B0GWJ7 208 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 GGT3PA6NGU5 568 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 MAGEB3O15480 346 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 PAHP00439 452 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 ALDOBP05062 364 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 OCMP0CE72 109 aaPredicted RBP9.68□□□□□ -0.86
LINC00539-204ENST00000608957 CD37P11049 281 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 SELEP16581 610 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 HNF1AP20823 631 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 AZGP1P25311 298 aaKnown RBP9.68□□□□□ -0.86
LINC00539-204ENST00000608957 TNFSF8P32971 234 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 PMELP40967 661 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 CLDN12P56749 244 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 UBE2V2Q15819 145 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 SPANXN2Q5MJ10 180 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 CLVS2Q5SYC1 327 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 LYPD6Q86Y78 171 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 CDH26Q8IXH8 852 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 FTMTQ8N4E7 242 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 JAGN1Q8N5M9 183 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 SAMD12Q8N8I0 201 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 BHLHE23Q8NDY6 225 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 CSNK2A3Q8NEV1 391 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 OR5H6Q8NGV6 325 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 OR51F2Q8NH61 342 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 ZFAND2BQ8WV99 257 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 RAB1CQ92928 201 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 SPSB1Q96BD6 273 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 MEGF10Q96KG7 1140 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 TECTBQ96PL2 329 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 UQCC2Q9BRT2 126 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 TMPRSS13Q9BYE2 586 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 NEK6Q9HC98 313 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 GPR173Q9NS66 373 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 IL19Q9UHD0 177 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 SPATA2Q9UM82 520 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 RHBDD3Q9Y3P4 386 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 ETV7Q9Y603 341 aa9.68□□□□□ -0.86
LINC00539-204ENST00000608957 TRAV20A0A0B4J274 112 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 IGHV3-64DA0A0J9YX35 117 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 ISPDA4D126 451 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 CD300LBA8K4G0 201 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 FAM25AB3EWG3 89 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 FAM25CB3EWG5 89 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 FAM25GB3EWG6 89 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 F5H5P2 479 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 GMDSO60547 372 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 NRASP01111 189 aa9.67□□□□□ -0.86
LINC00539-204ENST00000608957 ZFP36P26651 326 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms