RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 IL24Q13007 206 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 CNN3Q15417 329 aaKnown RBP11.27□□□□□ -0.61
TMEM259-212ENST00000607316 ATPAF1Q5TC12 328 aaPredicted RBP11.27□□□□□ -0.61
TMEM259-212ENST00000607316 IZUMO2Q6UXV1 221 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 SLC25A26Q70HW3 274 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 SLC36A1Q7Z2H8 476 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 ZNF485Q8NCK3 441 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 OR5D18Q8NGL1 313 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 RPS4Y2Q8TD47 263 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 TSEN15Q8WW01 171 aaKnown RBP11.27□□□□□ -0.61
TMEM259-212ENST00000607316 PP6455Q8WZ26 134 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.61
TMEM259-212ENST00000607316 ORAI1Q96D31 301 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 NKX3-1Q99801 234 aaPredicted RBP11.27□□□□□ -0.61
TMEM259-212ENST00000607316 PCGF1Q9BSM1 259 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 PKIBQ9C010 78 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 COMMD4Q9H0A8 199 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 HES4Q9HCC6 221 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 PAK1IP1Q9NWT1 392 aaPredicted RBP11.27□□□□□ -0.61
TMEM259-212ENST00000607316 OR14J1Q9UGF5 321 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 RPUSD1Q9UJJ7 312 aaKnown RBP11.27□□□□□ -0.61
TMEM259-212ENST00000607316 PCDHGB5Q9Y5G0 923 aa11.27□□□□□ -0.61
TMEM259-212ENST00000607316 PNMA8CA0A1B0GUJ8 204 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 IRGMA1A4Y4 181 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 SLC1A7O00341 560 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 SIGLEC5O15389 551 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 ANGPTL7O43827 346 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 NOS1APO75052 506 aaPredicted RBP11.26□□□□□ -0.61
TMEM259-212ENST00000607316 VENTXO95231 258 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 ATP6V1G2O95670 118 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 SERPINA3P01011 423 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 ACAA1P09110 424 aaPredicted RBP11.26□□□□□ -0.61
TMEM259-212ENST00000607316 CCDC159P0C7I6 412 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 MMP9P14780 707 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 NPBWR2P48146 333 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 MTCP1P56278 107 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 ARF6P62330 175 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 IL13RA1P78552 427 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 MRPL28Q13084 256 aaKnown RBP11.26□□□□□ -0.61
TMEM259-212ENST00000607316 CD276Q5ZPR3 534 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 TMPRSS11AQ6ZMR5 421 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 UTS2BQ765I0 119 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 TMEM185AQ8NFB2 350 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 UPRTQ96BW1 309 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 C10orf35Q96D05 121 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 OPALINQ96PE5 141 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 TBX15Q96SF7 602 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 PLCXD1Q9NUJ7 323 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 FKBP14Q9NWM8 211 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 BABAM2Q9NXR7 383 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 CNOT2Q9NZN8 540 aaKnown RBP11.26□□□□□ -0.61
TMEM259-212ENST00000607316 SLC25A10Q9UBX3 287 aaPredicted RBP11.26□□□□□ -0.61
TMEM259-212ENST00000607316 DHDHQ9UQ10 334 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 POLDIP2Q9Y2S7 368 aa11.26□□□□□ -0.61
TMEM259-212ENST00000607316 IGKV1-12A0A0C4DH73 117 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 EFCAB10A6NFE3 127 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 RNF212BA8MTL3 300 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 ZNF879B4DU55 563 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 TCF21O43680 179 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 IGKV1D-12P01611 117 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 NDUFB7P17568 137 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 BCL3P20749 454 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 RBP2P50120 134 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 SNU13P55769 128 aaKnown RBP11.25□□□□□ -0.61
TMEM259-212ENST00000607316 SMIM21Q3B7S5 101 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 LRRC10Q5BKY1 277 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 C6orf141Q5SZD1 244 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 RPL22L1Q6P5R6 122 aaKnown RBP11.25□□□□□ -0.61
TMEM259-212ENST00000607316 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 PHC2Q8IXK0 858 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 PDZD9Q8IXQ8 264 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 STX19Q8N4C7 294 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 OR51A2Q8NGJ7 313 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 OR52N1Q8NH53 320 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 SDSLQ96GA7 329 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 CEP19Q96LK0 163 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
TMEM259-212ENST00000607316 MYCBPQ99417 103 aaPredicted RBP11.25□□□□□ -0.61
TMEM259-212ENST00000607316 DCTN5Q9BTE1 182 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 DNTTIP1Q9H147 329 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 ZCCHC4Q9H5U6 513 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 RBFOX1Q9NWB1 397 aaKnown RBP11.25□□□□□ -0.61
TMEM259-212ENST00000607316 RASL12Q9NYN1 266 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 TAS2R4Q9NYW5 299 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 NUP50Q9UKX7 468 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 COL6A5A8TX70 2615 aa11.25□□□□□ -0.61
TMEM259-212ENST00000607316 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 H0YJX3 145 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 OGG1O15527 345 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 TOX4O94842 621 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 PPIAL4GP0DN37 164 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 PRDX2P32119 198 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 ATP1B3P54709 279 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
TMEM259-212ENST00000607316 DMKNQ6E0U4 476 aaPredicted RBP11.24□□□□□ -0.61
TMEM259-212ENST00000607316 EGFL6Q8IUX8 553 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms