RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TRAPPC2LH3BP13 241 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 IFNL4K9M1U5 179 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SLC17A2O00624 439 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 PDCD5O14737 125 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SLC22A1O15245 554 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 PPIHO43447 177 aaKnown RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 NOL3O60936 208 aaKnown RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 CYB5AP00167 134 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 LHBP01229 141 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 TFF1P04155 84 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SFTPBP07988 381 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SLC2A2P11168 524 aaPredicted RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 BCL3P20749 454 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 RPS19P39019 145 aaKnown RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 PDLIM4P50479 330 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SNU13P55769 128 aaKnown RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 CLDN12P56749 244 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 ERVK11-1P61568 191 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 RIN1Q13671 783 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 ZMYND11Q15326 602 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 CLEC12BQ2HXU8 276 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 ZNF181Q2M3W8 571 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 Q5PR19 223 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 C1orf100Q5SVJ3 147 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 FOXB2Q5VYV0 432 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 GLT8D1Q68CQ7 371 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 AWAT2Q6E213 333 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SFRP4Q6FHJ7 346 aaPredicted RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 FAM166AQ6J272 317 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 SFXN4Q6P4A7 337 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 CLEC2AQ6UVW9 174 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 DNM1P46Q6ZS02 220 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 TPRA1Q86W33 373 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 KRTAP1-3Q8IUG1 177 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 CDH26Q8IXH8 852 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 MKXQ8IYA7 352 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 C1orf87Q8N0U7 546 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 LRRC75A-AS1Q8N1F1 130 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 OR6M1Q8NGM8 313 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 OR10Z1Q8NGY1 313 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 C10orf105Q8TEF2 133 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 FAM168AQ92567 244 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 C1orf147Q96MC9 270 aaPredicted RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 UQCC2Q9BRT2 126 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 BARHL1Q9BZE3 327 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 ELL3Q9HB65 397 aaPredicted RBP6.45□□□□□ -1.38
MSH6-211ENST00000606499 ING4Q9UNL4 249 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 V9GY05 133 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 USF3Q68DE3 2245 aa6.45□□□□□ -1.38
MSH6-211ENST00000606499 MAST4O15021 2626 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 ISPDA4D126 451 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 NOTOA8MTQ0 251 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 AIPO00170 330 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 NOS1APO75052 506 aaPredicted RBP6.44□□□□□ -1.38
MSH6-211ENST00000606499 KDM4BO94953 1096 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 NXPH2O95156 264 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 IL1AP01583 271 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 IGHV2-70P01814 119 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 CD37P11049 281 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 PRKACAP17612 351 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 SERPINA2P20848 420 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 GLRA1P23415 457 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 GIFP27352 417 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 HTR2CP28335 458 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 CFHR2P36980 270 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 GPR6P46095 362 aaPredicted RBP6.44□□□□□ -1.38
MSH6-211ENST00000606499 CEBPDP49716 269 aaPredicted RBP6.44□□□□□ -1.38
MSH6-211ENST00000606499 ART1P52961 327 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 BTG1P62324 171 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 RSU1Q15404 277 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 RAB11BQ15907 218 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 SLC22A6Q4U2R8 563 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 OR10K2Q6IF99 312 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 GLIPR1L1Q6UWM5 242 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 ASCL4Q6XD76 172 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 ACP7Q6ZNF0 438 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 USP43Q70EL4 1123 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 FAM90A1Q86YD7 464 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 SAXO1Q8IYX7 474 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 ZSCAN4Q8NAM6 433 aaPredicted RBP6.44□□□□□ -1.38
MSH6-211ENST00000606499 TMEM104Q8NE00 496 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 DEFB108BQ8NET1 73 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 PXT1Q8NFP0 134 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 OR51D1Q8NGF3 324 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 OR5T2Q8NGG2 359 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 ZNF671Q8TAW3 534 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 TBC1D15Q8TC07 691 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 EMG1Q92979 244 aaKnown RBP6.44□□□□□ -1.38
MSH6-211ENST00000606499 FAM46BQ96A09 425 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 SLC25A28Q96A46 364 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 C12orf43Q96C57 262 aaKnown RBP6.44□□□□□ -1.38
MSH6-211ENST00000606499 FOXRED1Q96CU9 486 aaPredicted RBP6.44□□□□□ -1.38
MSH6-211ENST00000606499 S100A13Q99584 98 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 BCL7BQ9BQE9 202 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 PIMREGQ9BSJ6 248 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 BPESC1Q9GZL8 116 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 METTL9Q9H1A3 318 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 DCSTAMPQ9H295 470 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 NARFLQ9H6Q4 476 aa6.44□□□□□ -1.38
MSH6-211ENST00000606499 LIN7BQ9HAP6 207 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms