RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SF3B6Q9Y3B4 125 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-209ENST00000602783 ATP6V1E1P36543 226 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 CAPZA1P52907 286 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 TMED1Q13445 227 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 KPNB1Q14974 876 aaKnown RBP17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 SLC35E4Q6ICL7 350 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 FAM185AQ8N0U4 392 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 BATF2Q8N1L9 274 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 RORBQ92753 470 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 PPA2Q9H2U2 334 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 IMPAD1Q9NX62 359 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 POLDIP2Q9Y2S7 368 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 ORC6Q9Y5N6 252 aa17.3■□□□□ 0.36
PPFIA3-209ENST00000602783 TRBV23-1A0A0A0MS06 115 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 RFPL4AA6NLU0 287 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 RFPL4AL1F8VTS6 287 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 H3BNX3 289 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 EI24O14681 340 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 SYT7O43581 403 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 SULT1C4O75897 302 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 ALPLP05186 524 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 CEBPDP49716 269 aaPredicted RBP17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 HCP5Q6MZN7 132 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 FAM220AQ7Z4H9 259 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 CD177Q8N6Q3 437 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 BEND2Q8NDZ0 799 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 OR5D13Q8NGL4 314 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 TRMT10AQ8TBZ6 339 aaKnown RBP17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 C17orf50Q8WW18 174 aa17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.29■□□□□ 0.36
PPFIA3-209ENST00000602783 H3BUX3 64 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 ANGPTL7O43827 346 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 NOS1APO75052 506 aaPredicted RBP17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 NXPH2O95156 264 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 TSPAN15O95858 294 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 MPZP25189 248 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 ZNF85Q03923 595 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 TP53I3Q53FA7 332 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 CCDC121Q6ZUS5 278 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 CALHM1Q8IU99 346 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 PRSS35Q8N3Z0 413 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 FAM110DQ8TAY7 271 aaPredicted RBP17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 SSX3Q99909 188 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 NRIP2Q9BQI9 281 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 USE1Q9NZ43 259 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 GNG8Q9UK08 70 aa17.28■□□□□ 0.36
PPFIA3-209ENST00000602783 SLC1A7O00341 560 aa17.27■□□□□ 0.36
PPFIA3-209ENST00000602783 ISL1P61371 349 aa17.27■□□□□ 0.36
PPFIA3-209ENST00000602783 ZFP1Q6P2D0 407 aa17.27■□□□□ 0.36
PPFIA3-209ENST00000602783 ANGPTL5Q86XS5 388 aa17.27■□□□□ 0.36
PPFIA3-209ENST00000602783 HRASLS5Q96KN8 279 aa17.27■□□□□ 0.36
PPFIA3-209ENST00000602783 HES4Q9HCC6 221 aa17.27■□□□□ 0.36
PPFIA3-209ENST00000602783 C19orf12Q9NSK7 152 aa17.27■□□□□ 0.36
PPFIA3-209ENST00000602783 LOC107986453A0A1B0GWG9 222 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 FAM230AA0A1W2PPH8 454 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 ENTPD6O75354 484 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 GABRA5P31644 462 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 PRDX2P32119 198 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 KIR3DL2P43630 455 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 ALDH3A2P51648 485 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 LY6EQ16553 131 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 ZIK1Q3SY52 487 aaPredicted RBP17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 MKXQ8IYA7 352 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 ZNF561Q8N587 486 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 TRUB1Q8WWH5 349 aaKnown RBP17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 RNFT2Q96EX2 444 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 AJUBAQ96IF1 538 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 ADI1Q9BV57 179 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 PKIBQ9C010 78 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 CHST5Q9GZS9 411 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 FAM234AQ9H0X4 552 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 FBLN5Q9UBX5 448 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 OR14J1Q9UGF5 321 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 SLC7A11Q9UPY5 501 aa17.26■□□□□ 0.35
PPFIA3-209ENST00000602783 UBCP0CG48 685 aaKnown RBP17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 RPL31P62899 125 aaKnown RBP17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 ACTC1P68032 377 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 ACTA1P68133 377 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 IL24Q13007 206 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 UBE2V2Q15819 145 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 C2orf68Q2NKX9 166 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 PPP1R35Q8TAP8 253 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 MEGF9Q9H1U4 602 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 SIGLEC9Q9Y336 463 aa17.25■□□□□ 0.35
PPFIA3-209ENST00000602783 IGKV1-27A0A075B6S5 117 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 E9PQ18 207 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 GATBO75879 557 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 PAX6P26367 422 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 ERVK11-1P61568 191 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 SNRPGP62308 76 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 TMEM200BQ69YZ2 307 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 C1QL4Q86Z23 238 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 CBR4Q8N4T8 237 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 CCDC54Q8NEL0 328 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 OR4M1Q8NGD0 313 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 RNF166Q96A37 237 aaPredicted RBP17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 HEXA-AS1Q9H8Q6 139 aa17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 PRKDCP78527 4128 aaKnown RBP17.24■□□□□ 0.35
PPFIA3-209ENST00000602783 A0A1W2PPH5 198 aa17.23■□□□□ 0.35
PPFIA3-209ENST00000602783 J3QRE1 110 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms