RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 LIAT1Q6ZQX7 453 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 PLEKHG7Q6ZR37 379 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 MEPCEQ7L2J0 689 aaKnown RBP10.66□□□□□ -0.7
RPS28-204ENST00000602140 LHFPL4Q7Z7J7 247 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 ELMOD2Q8IZ81 293 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 OR14K1Q8NGZ2 314 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 DNAJC9Q8WXX5 260 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 MOB1AQ9H8S9 216 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 HES4Q9HCC6 221 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 OR52A1Q9UKL2 312 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 R4GMQ9 66 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 V9GYS6 101 aa10.66□□□□□ -0.7
RPS28-204ENST00000602140 A0A1B0GTI1 187 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 TCRBV3S1A0A5B6 114 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 FAM90A8PA6NJQ4 464 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 M0R129 80 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 RAB13P51153 203 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 ACTR3P61158 418 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 FAHD1Q6P587 224 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 ANGPTL5Q86XS5 388 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 CALHM1Q8IU99 346 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 SLC35F2Q8IXU6 374 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 LYG1Q8N1E2 194 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 DYNAPQ8N1N2 210 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 DTX3Q8N9I9 347 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 NRBF2Q96F24 287 aa10.65□□□□□ -0.7
RPS28-204ENST00000602140 H2AFY2Q9P0M6 372 aaPredicted RBP10.65□□□□□ -0.7
RPS28-204ENST00000602140 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.65□□□□□ -0.7
RPS28-204ENST00000602140 MEX3AA1L020 520 aaKnown RBP10.64□□□□□ -0.71
RPS28-204ENST00000602140 C17orf98A8MV24 154 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 VGLL3A8MV65 326 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 ZNF670-ZNF695F2Z2N8 137 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 K7N7A8 449 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 GYG2O15488 501 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 ARG1P05089 322 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 MPZP25189 248 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 DLX6P56179 175 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 ERVK11-1P61568 191 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 COL10A1Q03692 680 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 HABP2Q14520 560 aaPredicted RBP10.64□□□□□ -0.71
RPS28-204ENST00000602140 FAM189A2Q15884 450 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 NSUN5P1Q3KNT7 163 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 SAMD5Q5TGI4 173 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 TCEANCQ8N8B7 351 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 ASCC1Q8N9N2 400 aaKnown RBP10.64□□□□□ -0.71
RPS28-204ENST00000602140 TRMT10AQ8TBZ6 339 aaKnown RBP10.64□□□□□ -0.71
RPS28-204ENST00000602140 MNTQ99583 582 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 PRRG3Q9BZD7 231 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 PKIBQ9C010 78 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 ZNF702PQ9H963 129 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 ADGRL4Q9HBW9 690 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 MRM2Q9UI43 246 aaKnown RBP10.64□□□□□ -0.71
RPS28-204ENST00000602140 SLC22A13Q9Y226 551 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 SNX5Q9Y5X3 404 aa10.64□□□□□ -0.71
RPS28-204ENST00000602140 FAM230AA0A1W2PPH8 454 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 DHRS7CA6NNS2 312 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 H3BSH0 61 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 MITFO75030 526 aaPredicted RBP10.63□□□□□ -0.71
RPS28-204ENST00000602140 RPP14O95059 124 aaKnown RBP10.63□□□□□ -0.71
RPS28-204ENST00000602140 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
RPS28-204ENST00000602140 ZNF728P0DKX0 622 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 EPHA2P29317 976 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 EDDM3BP56851 147 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 EFNB1P98172 346 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 IL24Q13007 206 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 SSX2Q16385 188 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 DNAL1Q4LDG9 190 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 KPRPQ5T749 579 aaPredicted RBP10.63□□□□□ -0.71
RPS28-204ENST00000602140 AADACL4Q5VUY2 407 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 NXNL2Q5VZ03 156 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 CCBE1Q6UXH8 406 aaPredicted RBP10.63□□□□□ -0.71
RPS28-204ENST00000602140 Q6ZSR3 168 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 TMEM219Q86XT9 240 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 OR13D1Q8NGV5 346 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 FOXRED1Q96CU9 486 aaPredicted RBP10.63□□□□□ -0.71
RPS28-204ENST00000602140 MALSU1Q96EH3 234 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 IL4I1Q96RQ9 567 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 ABCB10Q9NRK6 738 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 SERTAD4Q9NUC0 356 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 CLN6Q9NWW5 311 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 SLC7A11Q9UPY5 501 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 TCF19Q9Y242 345 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 POMPQ9Y244 141 aa10.63□□□□□ -0.71
RPS28-204ENST00000602140 TBL2Q9Y4P3 447 aaKnown RBP10.63□□□□□ -0.71
RPS28-204ENST00000602140 A6NDX4 124 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 ODF3BA8MYP8 253 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 F8VVB4 439 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 F8VWA3 439 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 ZNF737O75373 536 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 FBXO24O75426 580 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 INMTO95050 263 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 CHRM2P08172 466 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 CD28P10747 220 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 DYNC1I2Q13409 638 aaKnown RBP10.62□□□□□ -0.71
RPS28-204ENST00000602140 UBE2V2Q15819 145 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 ODF4Q2M2E3 257 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 FBLN7Q53RD9 439 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 LDLRAD2Q5SZI1 272 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 SLX4IPQ5VYV7 408 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 ZNF626Q68DY1 528 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms