RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 DDX28Q9NUL7 540 aaKnown RBP12□□□□□ -0.49
NEAT1-203ENST00000601801 RBFOX1Q9NWB1 397 aaKnown RBP12□□□□□ -0.49
NEAT1-203ENST00000601801 MRM2Q9UI43 246 aaKnown RBP12□□□□□ -0.49
NEAT1-203ENST00000601801 POLR3KQ9Y2Y1 108 aaPredicted RBP12□□□□□ -0.49
NEAT1-203ENST00000601801 ETV7Q9Y603 341 aa12□□□□□ -0.49
NEAT1-203ENST00000601801 AUP1Q9Y679 476 aa12□□□□□ -0.49
NEAT1-203ENST00000601801 LHFPL6Q9Y693 200 aa12□□□□□ -0.49
NEAT1-203ENST00000601801 IGLV1-36A0A0B4J1U3 117 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 A0A0G2JK05 382 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 TRBV5-5A0A0J9YX44 114 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 SMIM30A4D0T7 59 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 TRAPPC2LH3BP13 241 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 TMEM178BH3BS89 294 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 AIPO00170 330 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 DCTN6O00399 190 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 ZNF593O00488 134 aaPredicted RBP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 CTDSPLO15194 276 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 CALCBP10092 127 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 PSMB10P40306 273 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 SRP9P49458 86 aaKnown RBP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 EIF2B2P49770 351 aaKnown RBP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 MMP16P51512 607 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 RIDAP52758 137 aaKnown RBP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 SEC61A1P61619 476 aaKnown RBP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 RPS11P62280 158 aaKnown RBP eCLIP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 MRPS10P82664 201 aaKnown RBP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 ZNF154Q13106 437 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 PDLIM3Q53GG5 364 aaPredicted RBP11.99□□□□□ -0.49
NEAT1-203ENST00000601801 UBE2NLQ5JXB2 153 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 CORO6Q6QEF8 472 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 DUSP18Q8NEJ0 188 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 DEFB108BQ8NET1 73 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 OR10AD1Q8NGE0 317 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 OR2G2Q8NGZ5 317 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 ZNRF4Q8WWF5 429 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 RAB40AQ8WXH6 277 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 MEGF10Q96KG7 1140 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 DERL3Q96Q80 235 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 OR14A2Q96R54 314 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 PDCD1LG2Q9BQ51 273 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 NOX4Q9NPH5 578 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 OR5V1Q9UGF6 321 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 KCNG2Q9UJ96 466 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 NUP50Q9UKX7 468 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 INSIG2Q9Y5U4 225 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 V9GY05 133 aa11.99□□□□□ -0.49
NEAT1-203ENST00000601801 FAM240BA0A1B0GVZ2 78 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 A8MXK9 166 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 F5H0A9 414 aaPredicted RBP11.98□□□□□ -0.49
NEAT1-203ENST00000601801 BOLA2-SMG1P6H3BVE0 249 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 LYRM1O43325 122 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 SULT1B1O43704 296 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 ZFPL1O95159 310 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 CD2P06729 351 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 SELEP16581 610 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 CPT2P23786 658 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 CAPZA1P52907 286 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 KRT77Q7Z794 578 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 ZDHHC22Q8N966 263 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 BHLHE23Q8NDY6 225 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 SLC26A10Q8NG04 563 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 OR2AJ1Q8NGZ0 328 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 DVL3Q92997 716 aaPredicted RBP11.98□□□□□ -0.49
NEAT1-203ENST00000601801 C11orf54Q9H0W9 315 aaPredicted RBP11.98□□□□□ -0.49
NEAT1-203ENST00000601801 BRD7Q9NPI1 651 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 ESM1Q9NQ30 184 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 TMEM100Q9NV29 134 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 COPZ2Q9P299 210 aa11.98□□□□□ -0.49
NEAT1-203ENST00000601801 CMYA5Q8N3K9 4069 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 LRRC30A6NM36 301 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 IFITM5A6NNB3 132 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 IQCF6A8MYZ5 107 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 F5H5K5 113 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 H0YL77 283 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 ORC5O43913 435 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 RPP14O95059 124 aaKnown RBP11.97□□□□□ -0.49
NEAT1-203ENST00000601801 WNT2P09544 360 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 SPNP16150 400 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 RFX2P48378 723 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 RAB25P57735 213 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 AP3S2P59780 193 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 UBA52P62987 128 aaKnown RBP11.97□□□□□ -0.49
NEAT1-203ENST00000601801 ECH1Q13011 328 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 PRR31Q5SQ13 230 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 FAM27D1Q5T7N8 215 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 ZNF57Q68EA5 555 aaPredicted RBP11.97□□□□□ -0.49
NEAT1-203ENST00000601801 COLCA1Q6ZS62 124 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 LINC00346Q8IVM7 164 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 ZBTB8BQ8NAP8 495 aaPredicted RBP11.97□□□□□ -0.49
NEAT1-203ENST00000601801 OR4M1Q8NGD0 313 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 MAP6Q96JE9 813 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 THAP7Q9BT49 309 aaPredicted RBP11.97□□□□□ -0.49
NEAT1-203ENST00000601801 C1QTNF5Q9BXJ0 243 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 TTTY10Q9BZA0 68 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 PPIL3Q9H2H8 161 aaKnown RBP11.97□□□□□ -0.49
NEAT1-203ENST00000601801 FRRS1LQ9P0K9 344 aa11.97□□□□□ -0.49
NEAT1-203ENST00000601801 PAIP2BQ9ULR5 123 aaKnown RBP11.97□□□□□ -0.49
NEAT1-203ENST00000601801 PPIAL4AQ9Y536 164 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms