RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 FAM216BQ8N7L0 139 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 MYDGFQ969H8 173 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 SEH1LQ96EE3 360 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 CEP19Q96LK0 163 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 PDCD1LG2Q9BQ51 273 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 CNTD2Q9H8S5 307 aa16.07■□□□□ 0.16
UPF1-212ENST00000601689 A0A1W2PPH5 198 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 RFPL4AA6NLU0 287 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 RNF212BA8MTL3 300 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 ZNF879B4DU55 563 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 RFPL4AL1F8VTS6 287 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 TOX4O94842 621 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 PLATP00750 562 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 HCKP08631 526 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 AQP4P55087 323 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 PAX2Q02962 417 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 BLMHQ13867 455 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 CDK5R1Q15078 307 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 CALHM1Q8IU99 346 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 TMEM185AQ8NFB2 350 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 GATAD2BQ8WXI9 593 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 RNF166Q96A37 237 aaPredicted RBP16.06■□□□□ 0.16
UPF1-212ENST00000601689 UPRTQ96BW1 309 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 PCGF1Q9BSM1 259 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 SMURF1Q9HCE7 757 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 PSORS1C1Q9UIG5 152 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 RPUSD1Q9UJJ7 312 aaKnown RBP16.06■□□□□ 0.16
UPF1-212ENST00000601689 PCDHGB5Q9Y5G0 923 aa16.06■□□□□ 0.16
UPF1-212ENST00000601689 C22orf46C9J442 243 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 MT-ND2P03891 347 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 POU3F4P49335 361 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 GTF2A1P52655 376 aaPredicted RBP16.05■□□□□ 0.16
UPF1-212ENST00000601689 CAV3P56539 151 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 FGF12P61328 243 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 PDCD1Q15116 288 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 USP43Q70EL4 1123 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 SLC25A26Q70HW3 274 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 OR51A4Q8NGJ6 313 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 OR13C9Q8NGT0 318 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 TBC1D15Q8TC07 691 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 FBLIM1Q8WUP2 373 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 SMIM19Q96E16 107 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 GAFA1Q96PS6 74 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 NRIP2Q9BQI9 281 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 OR14J1Q9UGF5 321 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 ZNF281Q9Y2X9 895 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 TPRKBQ9Y3C4 175 aa16.05■□□□□ 0.16
UPF1-212ENST00000601689 A0A1W2PQ09 198 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 E9PI62 339 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 SULT1B1O43704 296 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 XPNPEP2O43895 674 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 ALX3O95076 343 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 KNG1P01042 644 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 RAB3AP20336 220 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 PRDX2P32119 198 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 PPP3R1P63098 170 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 RIPK1Q13546 671 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 C6orf141Q5SZD1 244 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 PARP16Q8N5Y8 322 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 NRG4Q8WWG1 115 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 EMG1Q92979 244 aaKnown RBP16.04■□□□□ 0.16
UPF1-212ENST00000601689 SDSLQ96GA7 329 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 WDFY2Q96P53 400 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 KPTNQ9Y664 436 aa16.04■□□□□ 0.16
UPF1-212ENST00000601689 TRAV40A0A0B4J280 105 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 PTGES3LE9PB15 166 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 OGG1O15527 345 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 CHRM2P08172 466 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 WNT4P56705 351 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 ARF6P62330 175 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 ZNRF1Q8ND25 227 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 OR10AC1Q8NH08 325 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 THRSPQ92748 146 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 SLAMF9Q96A28 289 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 ZNF488Q96MN9 340 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 GPER1Q99527 375 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 DCTN5Q9BTE1 182 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 RHOFQ9HBH0 211 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 HES4Q9HCC6 221 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 ONECUT1Q9UBC0 465 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 CKLFQ9UBR5 152 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 CLEC2DQ9UHP7 191 aa16.03■□□□□ 0.16
UPF1-212ENST00000601689 IGKV1D-17A0A075B6S4 117 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 TRBV23-1A0A0A0MS06 115 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 hCG_1809904A0A1W2PP81 198 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 A0A1W2PPE2 198 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 A0A1W2PR64 198 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 A0A1W2PRV1 198 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 TRIM77I1YAP6 450 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 SOX2P48431 317 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 PDZK1IP1Q13113 114 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 DGUOKQ16854 277 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 YIF1BQ5BJH7 314 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 IZUMO2Q6UXV1 221 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 ZSCAN4Q8NAM6 433 aaPredicted RBP16.02■□□□□ 0.16
UPF1-212ENST00000601689 PPP1R35Q8TAP8 253 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 DACT3Q96B18 629 aaPredicted RBP16.02■□□□□ 0.16
UPF1-212ENST00000601689 MND1Q9BWT6 205 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 FAM234AQ9H0X4 552 aa16.02■□□□□ 0.16
UPF1-212ENST00000601689 IGKV1-9A0A0C4DH69 117 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms