RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TLNRD1Q9H1K6 362 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 DYNLRB1Q9NP97 96 aa19.16■□□□□ 0.66
IRF3-228ENST00000601291 IGHV3-64DA0A0J9YX35 117 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 PRSS44E7EML9 344 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 GOSR1O95249 250 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 VEGFCP49767 419 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 TNFAIP6P98066 277 aaPredicted RBP19.15■□□□□ 0.66
IRF3-228ENST00000601291 PRAMEF6Q5VXH4 476 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 ELP2Q6IA86 826 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 Q8IYB0 196 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 Q8NFD4 153 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 FBXW5Q969U6 566 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 MEGF10Q96KG7 1140 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 OR2V2Q96R30 315 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 NICN1Q9BSH3 213 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 IL19Q9UHD0 177 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 ANKHD1Q8IWZ3 2542 aaKnown RBP19.15■□□□□ 0.66
IRF3-228ENST00000601291 TRAV18A0A075B6X5 111 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 C17orf100A8MU93 164 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 RHBDL1O75783 438 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 PTBP3O95758 552 aaKnown RBP19.15■□□□□ 0.66
IRF3-228ENST00000601291 ADH4P08319 380 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 NPBWR2P48146 333 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 SNX29P2Q8IUI4 249 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 MUC15Q8N387 334 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 Q8N402 240 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 OR10R2Q8NGX6 335 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 Q96M66 194 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 ABHD1Q96SE0 405 aa19.15■□□□□ 0.66
IRF3-228ENST00000601291 RAB27BO00194 218 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 PTH2RP49190 550 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 FGF12P61328 243 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 MOGAT2Q3SYC2 334 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 OR8H2Q8N162 312 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 FAM89BQ8N5H3 189 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 SDHCQ99643 169 aaPredicted RBP19.14■□□□□ 0.65
IRF3-228ENST00000601291 MS4A5Q9H3V2 200 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 UFSP2Q9NUQ7 469 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 FAIMQ9NVQ4 179 aa19.14■□□□□ 0.65
IRF3-228ENST00000601291 RBFOX1Q9NWB1 397 aaKnown RBP19.14■□□□□ 0.65
IRF3-228ENST00000601291 A6NNC1 897 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 CTDSPLO15194 276 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 AKR7A2O43488 359 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 UPK1BO75841 260 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 ACAA1P09110 424 aaPredicted RBP19.13■□□□□ 0.65
IRF3-228ENST00000601291 SNRPD2P62316 118 aaKnown RBP19.13■□□□□ 0.65
IRF3-228ENST00000601291 MRPS10P82664 201 aaKnown RBP19.13■□□□□ 0.65
IRF3-228ENST00000601291 SRSF1Q07955 248 aaKnown RBP eCLIP19.13■□□□□ 0.657e-7■■□□□ 14.5
IRF3-228ENST00000601291 ZNF181Q2M3W8 571 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 BATF2Q8N1L9 274 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 CHST4Q8NCG5 386 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 ITLN1Q8WWA0 313 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 POM121Q96HA1 1249 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 FN3KRPQ9HA64 309 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 ST3GAL6Q9Y274 331 aa19.13■□□□□ 0.65
IRF3-228ENST00000601291 A0A0A6YYD4 124 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 hCG_1807616A0A1W2PRN6 198 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 HLA-DQB1P01920 261 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 CD55P08174 381 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 PGA5P0DJD9 388 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 PLA2G2AP14555 144 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 GABRR1P24046 479 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 GATA4P43694 442 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 RBM11P57052 281 aaKnown RBP19.12■□□□□ 0.65
IRF3-228ENST00000601291 MPPED2Q15777 294 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 FAM209AQ5JX71 171 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 EMG1Q92979 244 aaKnown RBP19.12■□□□□ 0.65
IRF3-228ENST00000601291 RAB3CQ96E17 227 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 SPOCK3Q9BQ16 436 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 ABCB10Q9NRK6 738 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 C1orf123Q9NWV4 160 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 FBXO9Q9UK97 447 aaPredicted RBP19.12■□□□□ 0.65
IRF3-228ENST00000601291 ADGRG4Q8IZF6 3080 aa19.12■□□□□ 0.65
IRF3-228ENST00000601291 TNFRSF1AP19438 455 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 TESK1Q15569 626 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 MST1LQ2TV78 715 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 PIGYQ3MUY2 71 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 NHLRC3Q5JS37 347 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 TRIQKQ629K1 86 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 WDR82Q6UXN9 313 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 C11orf53Q8IXP5 236 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 FAM58AQ8N1B3 248 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 POC1AQ8NBT0 407 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 ZNF488Q96MN9 340 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 NRIP2Q9BQI9 281 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 EGLN1Q9GZT9 426 aa19.11■□□□□ 0.65
IRF3-228ENST00000601291 J3QKU1 62 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 HS3ST1O14792 307 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 SOCS1O15524 211 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 TPD52L2O43399 206 aaKnown RBP19.1■□□□□ 0.65
IRF3-228ENST00000601291 NOS1APO75052 506 aaPredicted RBP19.1■□□□□ 0.65
IRF3-228ENST00000601291 PRKACAP17612 351 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 ARL6IP1Q15041 203 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 TAF9Q16594 264 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 SWI5Q1ZZU3 235 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 PCGF3Q3KNV8 242 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 ZNF826PQ6ZT77 177 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 ERGIC1Q969X5 290 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM208BQ5VWN6 2430 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A10PA6NDY2 464 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms