RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 BORCS8Q96FH0 119 aa12.58□□□□□ -0.4
SMG9-211ENST00000601170 CMSS1Q9BQ75 279 aaKnown RBP12.58□□□□□ -0.4
SMG9-211ENST00000601170 UQCC1Q9NVA1 299 aa12.58□□□□□ -0.4
SMG9-211ENST00000601170 TMEM38BQ9NVV0 291 aa12.58□□□□□ -0.4
SMG9-211ENST00000601170 HSF4Q9ULV5 492 aa12.58□□□□□ -0.4
SMG9-211ENST00000601170 CNTRLQ7Z7A1 2325 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 ZNF850A8MQ14 1090 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 K7EPK0 472 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 NTN3O00634 580 aaPredicted RBP12.57□□□□□ -0.4
SMG9-211ENST00000601170 ZNF205O95201 554 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 FCGR3AP08637 254 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 RPL12P30050 165 aaKnown RBP12.57□□□□□ -0.4
SMG9-211ENST00000601170 FOLR3P41439 243 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 RBP2P50120 134 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 GGNBP1Q5YKI7 109 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 EIF5AL1Q6IS14 154 aaKnown RBP12.57□□□□□ -0.4
SMG9-211ENST00000601170 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
SMG9-211ENST00000601170 FAM71E2Q8N5Q1 922 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 OR14L1PQ8NHC6 308 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 DYRK2Q92630 601 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 TOMM40LQ969M1 308 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
SMG9-211ENST00000601170 SULT4A1Q9BR01 284 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 RHOFQ9HBH0 211 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 NECAP2Q9NVZ3 263 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 TUBD1Q9UJT1 453 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 FAM96BQ9Y3D0 163 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 DNPH1O43598 174 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 MED6O75586 246 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 DEDDO75618 318 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 IFNA21P01568 189 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 NME2P22392 152 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 IL32P24001 234 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 SRD5A2P31213 254 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 HTR5AP47898 357 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 PIGPP57054 158 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 SMCO1Q147U7 214 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 GGNQ86UU5 652 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 CBLN2Q8IUK8 224 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
SMG9-211ENST00000601170 LSM5Q9Y4Y9 91 aaKnown RBP12.57□□□□□ -0.4
SMG9-211ENST00000601170 ZNF716A6NP11 495 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 GEMIN2O14893 280 aaKnown RBP12.56□□□□□ -0.4
SMG9-211ENST00000601170 CHATP28329 748 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 LPAR6P43657 344 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 CARD18P57730 90 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 ZFP36L1Q07352 338 aaKnown RBP12.56□□□□□ -0.4
SMG9-211ENST00000601170 BRICD5Q6PL45 260 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 LHFPL2Q6ZUX7 228 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 MARS2Q96GW9 593 aaKnown RBP12.56□□□□□ -0.4
SMG9-211ENST00000601170 PRRX2Q99811 253 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 SEC11CQ9BY50 192 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 FBXL17Q9UF56 701 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 IGKV1-12A0A0C4DH73 117 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 OR6C6A6NF89 314 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 PATE3B3GLJ2 98 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 YKT6O15498 198 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 SCGB1D2O95969 90 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 CST4P01036 141 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 NRASP01111 189 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 IGKV1D-12P01611 117 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 P04436 131 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 H2AFB1P0C5Y9 115 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 MUC1P15941 1255 aaPredicted RBP12.56□□□□□ -0.4
SMG9-211ENST00000601170 DTYMKP23919 212 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 FCGR2CP31995 323 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
SMG9-211ENST00000601170 TRA2AQ13595 282 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMG9-211ENST00000601170 PIGYQ3MUY2 71 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 TMEM268Q5VZI3 342 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 AAED1Q7RTV5 226 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 OR10AD1Q8NGE0 317 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 MAFAQ8NHW3 353 aaPredicted RBP12.56□□□□□ -0.4
SMG9-211ENST00000601170 CPT1CQ8TCG5 803 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 SGCZQ96LD1 299 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 NRIP2Q9BQI9 281 aa12.56□□□□□ -0.4
SMG9-211ENST00000601170 FAM221AA4D161 298 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 TERTO14746 1132 aaKnown RBP12.55□□□□□ -0.4
SMG9-211ENST00000601170 CXCL13O43927 109 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 FBXO24O75426 580 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 SNAPINO95295 136 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 SULT1A2P50226 295 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 CAV2P51636 162 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 FXYD4P59646 89 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 PSG4Q00888 419 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 HFEQ30201 348 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 SP6Q3SY56 376 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 TMEM42Q69YG0 159 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 DHRS11Q6UWP2 260 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.55□□□□□ -0.4
SMG9-211ENST00000601170 KCNE4Q8WWG9 221 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 FOXB1Q99853 325 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 NDRG3Q9UGV2 375 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 TNRC18O15417 2968 aaPredicted RBP12.55□□□□□ -0.4
SMG9-211ENST00000601170 ARID1AO14497 2285 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 CCDC163A0A0D9SF12 145 aa12.55□□□□□ -0.4
SMG9-211ENST00000601170 FARS2O95363 451 aaKnown RBP12.55□□□□□ -0.4
SMG9-211ENST00000601170 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms