RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 AGBL5Q8NDL9 886 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 INTS12Q96CB8 462 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 NTNG2Q96CW9 530 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 SAT2Q96F10 170 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 SULT4A1Q9BR01 284 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 SMIM3Q9BZL3 60 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 PLA2G2EQ9NZK7 142 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 LSM5Q9Y4Y9 91 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 NSG1A0A0A6YYJ2 146 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 FAM221AA4D161 298 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 ZNF850A8MQ14 1090 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 C9J4A7 227 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 DEDDO75618 318 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 CBR3O75828 277 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 FARS2O95363 451 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 SCGB1D2O95969 90 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 H2AFB1P0C5Y9 115 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 ECI1P42126 302 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 PIGPP57054 158 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 PIGYQ3MUY2 71 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 GPR137CQ8N3F9 429 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 ESX1Q8N693 406 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 OR1F12Q8NHA8 337 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 CMSS1Q9BQ75 279 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 SEC11CQ9BY50 192 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 DECR2Q9NUI1 292 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 FBXL17Q9UF56 701 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 WDFY4Q6ZS81 3184 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 MUC3AQ02505 3323 aa17.59■□□□□ 0.41
SHKBP1-225ENST00000600733 H7C2Y5 167 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 TAAR5O14804 337 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 AGPAT2O15120 278 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 ZNF32P17041 273 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 FCGR2CP31995 323 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 ID4P47928 161 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 CAV2P51636 162 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 MLF1P58340 268 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 FLI1Q01543 452 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 MARS2Q96GW9 593 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 NRIP2Q9BQI9 281 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 SAV1Q9H4B6 383 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 GEMIN2O14893 280 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 FCGR3AP08637 254 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 B3GALT5-AS1P59052 145 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 RAC3P60763 192 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 TSPO2Q5TGU0 170 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 TMEM268Q5VZI3 342 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 PMS2CLQ68D20 193 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 CLEC9AQ6UXN8 241 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 SPAG16Q8N0X2 631 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 CCDC54Q8NEL0 328 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 OR2Y1Q8NGV0 311 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 TMEM38BQ9NVV0 291 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 NDRG3Q9UGV2 375 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 TUBD1Q9UJT1 453 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 EDARQ9UNE0 448 aa17.58■□□□□ 0.4
SHKBP1-225ENST00000600733 SHANK1Q9Y566 2161 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 IGKV1-12A0A0C4DH73 117 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 NDUFA2O43678 99 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 IFNA21P01568 189 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 IGKV1D-12P01611 117 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 GLI4P10075 376 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 PVALBP20472 110 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 TMEM33P57088 247 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 FXYD4P59646 89 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 HLA-CQ95604 372 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 BORCS8Q96FH0 119 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 PRRX2Q99811 253 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 RCC2Q9P258 522 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 PRELID3BQ9Y3B1 194 aa17.57■□□□□ 0.4
SHKBP1-225ENST00000600733 SNAPINO95295 136 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 CST4P01036 141 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 CHATP28329 748 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 HTR5AP47898 357 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 RBP2P50120 134 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 EIF5AP63241 154 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 SMCO1Q147U7 214 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 CNN3Q15417 329 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 DHRS7BQ6IAN0 325 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 EIF5AL1Q6IS14 154 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 OR10AD1Q8NGE0 317 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 NECAP2Q9NVZ3 263 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 HSF4Q9ULV5 492 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 AMDHD2Q9Y303 409 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 CELSR3Q9NYQ7 3312 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 CCDC85CA6NKD9 419 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 OR5AC1P0C628 307 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 SULT1A2P50226 295 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 PDCD1Q15116 288 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 OR14L1PQ8NHC6 308 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 FGFBP3Q8TAT2 258 aa17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 SF3B5Q9BWJ5 86 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-225ENST00000600733 GJE1A6NN92 205 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 NRASP01111 189 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 CST2P09228 141 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 ZNF728P0DKX0 622 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 NFYBP25208 207 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 CARD18P57730 90 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 GGNQ86UU5 652 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms