RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CMSS1Q9BQ75 279 aaKnown RBP10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 WDR13Q9H1Z4 485 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 SLC7A10Q9NS82 523 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 PCDHB10Q9UN67 800 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 B3GALT5-AS1P59052 145 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 GUCA2BQ16661 112 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 FAM27BQ5VT28 67 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 H3F3CQ6NXT2 135 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 CLRN3Q8NCR9 226 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR5M9Q8NGP3 310 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR13G1Q8NGZ3 307 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 CHST5Q9GZS9 411 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF98A6NK75 572 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 DHRS7CA6NNS2 312 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 TXNL1O43396 289 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 SYNGR4O95473 234 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 S100A9P06702 114 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 SP9P0CG40 484 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 THBS4P35443 961 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 MRPS34P82930 218 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 HES3Q5TGS1 186 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 CYB5R2Q6BCY4 276 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 C11orf87Q6NUJ2 197 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 CLEC18BQ6UXF7 455 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 SLC25A26Q70HW3 274 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR2W3Q7Z3T1 314 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 SULF2Q8IWU5 870 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF100Q8IYN0 542 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 PTX4Q96A99 478 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 MRPS24Q96EL2 167 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 METTL9Q9H1A3 318 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZFHX4Q86UP3 3567 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 A0A1W2PNU3 283 aaPredicted RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 SCGNO76038 276 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ONECUT2O95948 504 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 GSTP1P09211 210 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 C10orf128Q5T292 105 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF585AQ6P3V2 769 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 CLEC9AQ6UXN8 241 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR51F2Q8NH61 342 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 PSMF1Q92530 271 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZC3H10Q96K80 434 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 C20orf24Q9BUV8 137 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 SHARPINQ9H0F6 387 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 GPR35Q9HC97 309 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 FOXD3Q9UJU5 478 aaPredicted RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 SLC7A11Q9UPY5 501 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 C14orf166Q9Y224 244 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 TIMM10BQ9Y5J6 103 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 MED19A0JLT2 244 aaPredicted RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF716A6NP11 495 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 B4E171 279 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF587BE7ETH6 402 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 HPP00738 406 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 TSPAN7P41732 249 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 RBP2P50120 134 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 RAB35Q15286 201 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF239Q16600 458 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 PEG10Q86TG7 708 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR2M7Q8NG81 312 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 PP6455Q8WZ26 134 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 HAS2Q92819 552 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 GPHA2Q96T91 129 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 EDEM2Q9BV94 578 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 REG4Q9BYZ8 158 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 ABI3Q9P2A4 366 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 B4GALT7Q9UBV7 327 aa10.04□□□□□ -0.8
ARHGEF1-220ENST00000600274 OTOGLQ3ZCN5 2332 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 MT-CO3P00414 261 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 APOC1P02654 83 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 NME2P22392 152 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 PMP22Q01453 160 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 SNTB1Q13884 538 aaKnown RBP10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 DCAF10Q5QP82 559 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR2H1Q9GZK4 316 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 PARPBPQ9NWS1 579 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 ST3GAL6Q9Y274 331 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 IGKV1-27A0A075B6S5 117 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 M0R036 132 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 MFNGO00587 321 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 IGHEP01854 428 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 ACP1P24666 158 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 KCNJ3P48549 501 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 KRBOX4Q5JUW0 171 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 GCNT2Q8N0V5 402 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 CA5BP1Q8WTZ4 195 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 KCNE4Q8WWG9 221 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 DNTTIP1Q9H147 329 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 WNT5BQ9H1J7 359 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 GLS2Q9UI32 602 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 LSM5Q9Y4Y9 91 aaKnown RBP10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 LY86O95711 162 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 UBBP0CG47 229 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 EDN3P14138 238 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 AGTR1P30556 359 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms