RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PDZK1IP1Q13113 114 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 C22orf42Q6IC83 251 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 SLC25A26Q70HW3 274 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 POC1AQ8NBT0 407 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 MAPK1IP1LQ8NDC0 245 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 ZNF671Q8TAW3 534 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 RAB1CQ92928 201 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 TCF7L1Q9HCS4 588 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 TXNL4BQ9NX01 149 aaKnown RBP15.79■□□□□ 0.12
CCDC9-205ENST00000600117 POLDIP2Q9Y2S7 368 aa15.79■□□□□ 0.12
CCDC9-205ENST00000600117 PPIAL4EA0A075B759 164 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 IGKV1-12A0A0C4DH73 117 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 PPIAL4DF5H284 164 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 WNT9BO14905 357 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 MAGEB3O15480 346 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 CD5LO43866 347 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 PLATP00750 562 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 IGKV1D-12P01611 117 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 PPIAL4FP0DN26 164 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 CD37P11049 281 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 CALRP27797 417 aaKnown RBP15.78■□□□□ 0.12
CCDC9-205ENST00000600117 ERVK11-1P61568 191 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 BTG1P62324 171 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 CHRFAM7AQ494W8 412 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 BOLLQ8N9W6 283 aaKnown RBP15.78■□□□□ 0.12
CCDC9-205ENST00000600117 C19orf18Q8NEA5 215 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 OR5D18Q8NGL1 313 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 TIMD4Q96H15 378 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 ZNF488Q96MN9 340 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 GFI1Q99684 422 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 NRIP2Q9BQI9 281 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 WDR13Q9H1Z4 485 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 EXOSC4Q9NPD3 245 aaKnown RBP15.78■□□□□ 0.12
CCDC9-205ENST00000600117 SNTG1Q9NSN8 517 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 MTCH1Q9NZJ7 389 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 SSR3Q9UNL2 185 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 PPIAL4AQ9Y536 164 aa15.78■□□□□ 0.12
CCDC9-205ENST00000600117 SVEP1Q4LDE5 3571 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 IGHV4-61A0A0C4DH41 118 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 MEGF11A6BM72 1044 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 LGALS8O00214 317 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 SPRY1O43609 319 aaPredicted RBP15.77■□□□□ 0.12
CCDC9-205ENST00000600117 ZNF93P35789 620 aaPredicted RBP15.77■□□□□ 0.12
CCDC9-205ENST00000600117 TEX36Q5VZQ5 186 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 PEG10Q86TG7 708 aaKnown RBP15.77■□□□□ 0.12
CCDC9-205ENST00000600117 SATL1Q86VE3 508 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 LRRC28Q86X40 367 aaPredicted RBP15.77■□□□□ 0.12
CCDC9-205ENST00000600117 CDH26Q8IXH8 852 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 SAXO1Q8IYX7 474 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 NKAIN3Q8N8D7 197 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 SLAMF9Q96A28 289 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 SEH1LQ96EE3 360 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 CPNE2Q96FN4 548 aaPredicted RBP15.77■□□□□ 0.12
CCDC9-205ENST00000600117 CHCHD6Q9BRQ6 235 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 TMEM165Q9HC07 324 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 YAE1D1Q9NRH1 226 aa15.77■□□□□ 0.12
CCDC9-205ENST00000600117 TRAV1-2A0A0B4J238 106 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 F8VVB4 439 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 F8VWA3 439 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 ANGPTL7O43827 346 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 OR3A4PP47883 348 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 SFRP4Q6FHJ7 346 aaPredicted RBP15.76■□□□□ 0.11
CCDC9-205ENST00000600117 C1QL2Q7Z5L3 287 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 MKXQ8IYA7 352 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 ZSCAN4Q8NAM6 433 aaPredicted RBP15.76■□□□□ 0.11
CCDC9-205ENST00000600117 GPER1Q99527 375 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 FUNDC2Q9BWH2 189 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 REG4Q9BYZ8 158 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 SLITRK2Q9H156 845 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 RNF167Q9H6Y7 350 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 HES4Q9HCC6 221 aa15.76■□□□□ 0.11
CCDC9-205ENST00000600117 OOEPA6NGQ2 149 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 HAX1O00165 279 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 TNFRSF13BO14836 293 aaPredicted RBP15.75■□□□□ 0.11
CCDC9-205ENST00000600117 GLRA1P23415 457 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 MDH2P40926 338 aaKnown RBP15.75■□□□□ 0.11
CCDC9-205ENST00000600117 GMFBP60983 142 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 TIMM50Q3ZCQ8 353 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 ZNF404Q494X3 552 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 TMEM155Q4W5P6 130 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 ASCL4Q6XD76 172 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 GDPGP1Q6ZNW5 385 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 FAM90A1Q86YD7 464 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 BATF2Q8N1L9 274 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 JAGN1Q8N5M9 183 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 DEFB108BQ8NET1 73 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 PXT1Q8NFP0 134 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 OR51F2Q8NH61 342 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 CLDND2Q8NHS1 167 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 TNFAIP8L1Q8WVP5 186 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 CEP19Q96LK0 163 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 TMEM246Q9BRR3 403 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 CENPOQ9BU64 300 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 CNTD2Q9H8S5 307 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 SCOCQ9UIL1 159 aa15.75■□□□□ 0.11
CCDC9-205ENST00000600117 IGHV3OR15-7A0A075B7D8 119 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 LOC100506127A0A0U1RQW1 187 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 ISPDA4D126 451 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 AIREO43918 545 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 KDM4BO94953 1096 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms