RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 K7N7A8 449 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 PSMD9O00233 223 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 DLGAP1O14490 977 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 E2F6O75461 281 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 HOXB6P17509 224 aaKnown RBP17.07■□□□□ 0.32
PNKP-212ENST00000599454 MPZP25189 248 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 CEBPDP49716 269 aaPredicted RBP17.07■□□□□ 0.32
PNKP-212ENST00000599454 HCCSP53701 268 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 APOFQ13790 326 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 PLA1AQ53H76 456 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 ZNF626Q68DY1 528 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 TMEM42Q69YG0 159 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 PIGWQ7Z7B1 504 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 DYNAPQ8N1N2 210 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 ASB9Q96DX5 294 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 MOB1AQ9H8S9 216 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 SLC25A19Q9HC21 320 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 OR14J1Q9UGF5 321 aa17.07■□□□□ 0.32
PNKP-212ENST00000599454 PQLC2LA1A4F0 135 aa17.06■□□□□ 0.32
PNKP-212ENST00000599454 GNGT2O14610 69 aa17.06■□□□□ 0.32
PNKP-212ENST00000599454 ZNF728P0DKX0 622 aa17.06■□□□□ 0.32
PNKP-212ENST00000599454 RAB13P51153 203 aa17.06■□□□□ 0.32
PNKP-212ENST00000599454 SSX2Q16385 188 aa17.06■□□□□ 0.32
PNKP-212ENST00000599454 DHRS7CA6NNS2 312 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 H3BUI4 141 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 TTRP02766 147 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 PIPP12273 146 aaPredicted RBP17.05■□□□□ 0.32
PNKP-212ENST00000599454 ANXA8P13928 327 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 ARSJQ5FYB0 599 aaPredicted RBP17.05■□□□□ 0.32
PNKP-212ENST00000599454 TMEM179BQ7Z7N9 219 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 TMEM219Q86XT9 240 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 PKIBQ9C010 78 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 DNAJB9Q9UBS3 223 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 IKZF2Q9UKS7 526 aa17.05■□□□□ 0.32
PNKP-212ENST00000599454 CHRM2P08172 466 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 OR12D2P58182 307 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 ACTR3P61158 418 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 ERVK11-1P61568 191 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 MFGE8Q08431 387 aaPredicted RBP17.04■□□□□ 0.32
PNKP-212ENST00000599454 IL24Q13007 206 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 KIAA2026Q5HYC2 2103 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 MINOS1Q5TGZ0 78 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 ASRGL1Q7L266 308 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 ADGRG5Q8IZF4 528 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 WFDC9Q8NEX5 89 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 NSL1Q96IY1 281 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 GPR173Q9NS66 373 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 SLC22A13Q9Y226 551 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 MINOS1-NBL1R4GNA1 71 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 V9GYS6 101 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 DNAH3Q8TD57 4116 aa17.04■□□□□ 0.32
PNKP-212ENST00000599454 PRR32B1ATL7 298 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 LOC110117498-PIK3R3F6TDL0 507 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 F2RL2O00254 374 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 ATP8B1O43520 1251 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 MRPL3P09001 348 aaKnown RBP17.03■□□□□ 0.32
PNKP-212ENST00000599454 IGHV1-8P0DP01 117 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 CD33P20138 364 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 AZGP1P25311 298 aaKnown RBP17.03■□□□□ 0.32
PNKP-212ENST00000599454 VDAC2P45880 294 aaPredicted RBP17.03■□□□□ 0.32
PNKP-212ENST00000599454 ESRRGP62508 458 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 COL10A1Q03692 680 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 MEF2CQ06413 473 aaPredicted RBP17.03■□□□□ 0.32
PNKP-212ENST00000599454 SNAPC1Q16533 368 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 FOXB2Q5VYV0 432 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 GDPD3Q7L5L3 318 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 ELMOD2Q8IZ81 293 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 ASCC1Q8N9N2 400 aaKnown RBP17.03■□□□□ 0.32
PNKP-212ENST00000599454 MNTQ99583 582 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 COPS3Q9UNS2 423 aa17.03■□□□□ 0.32
PNKP-212ENST00000599454 CCDC182A6NF36 153 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 ZNF737O75373 536 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 SRSF10O75494 262 aaKnown RBP17.02■□□□□ 0.32
PNKP-212ENST00000599454 EDDM3BP56851 147 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 DYNC1I2Q13409 638 aaKnown RBP17.02■□□□□ 0.32
PNKP-212ENST00000599454 LDLRAD2Q5SZI1 272 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 BCL2L15Q5TBC7 163 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 Q6ZSR3 168 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 OR8H2Q8N162 312 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 OR14K1Q8NGZ2 314 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 DNAJC9Q8WXX5 260 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 ZNF714Q96N38 554 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 OR5M11Q96RB7 305 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 CNN2Q99439 309 aaKnown RBP17.02■□□□□ 0.32
PNKP-212ENST00000599454 TVP23BQ9NYZ1 205 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 GTF2A1LQ9UNN4 478 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 R4GMQ9 66 aa17.02■□□□□ 0.32
PNKP-212ENST00000599454 AQP12BA6NM10 295 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 BLCAPP62952 87 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 CD83Q01151 205 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 TMEM236Q5W0B7 351 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 ZNF322Q6U7Q0 402 aaPredicted RBP17.01■□□□□ 0.31
PNKP-212ENST00000599454 AQP12AQ8IXF9 295 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 CCDC124Q96CT7 223 aaKnown RBP17.01■□□□□ 0.31
PNKP-212ENST00000599454 TTTY10Q9BZA0 68 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 OR52A1Q9UKL2 312 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 SNX5Q9Y5X3 404 aa17.01■□□□□ 0.31
PNKP-212ENST00000599454 A0A1B0GTI1 187 aa17■□□□□ 0.31
PNKP-212ENST00000599454 hADV38S2A0JD32 116 aa17■□□□□ 0.31
PNKP-212ENST00000599454 DNAJC8O75937 253 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms