RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 THRSPQ92748 146 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 DERL3Q96Q80 235 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 OR51E2Q9H255 320 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 AURKAIP1Q9NWT8 199 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 DHDHQ9UQ10 334 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 INSIG2Q9Y5U4 225 aa11.57□□□□□ -0.56
SHKBP1-218ENST00000598907 GGT3PA6NGU5 568 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 H3BSH0 61 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 CST4P01036 141 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 UCHL1P09936 223 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 OCM2P0CE71 109 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 OR2T2Q6IF00 324 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 ZNF529Q6P280 563 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 CEACAM19Q7Z692 300 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 CSNK2A3Q8NEV1 391 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 OR56B2PQ8NGI1 322 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 OR13C3Q8NGS6 347 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 LINC01006Q8NI28 216 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 TSEN15Q8WW01 171 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 FGGYQ96C11 551 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 ADAT3Q96EY9 351 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 PPIL3Q9H2H8 161 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 TXNL4BQ9NX01 149 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 PIGLQ9Y2B2 252 aa11.56□□□□□ -0.56
SHKBP1-218ENST00000598907 COL7A1Q02388 2944 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 ZNF816-ZNF321PA0A0X1KG74 233 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 CLPXO76031 633 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 CD2P06729 351 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 FAHP16930 419 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 IGFBP3P17936 291 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 MAPK3P27361 379 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 SOX2P48431 317 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 MMP15P51511 669 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 KLF3P57682 345 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 PROK1P58294 105 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 TIMM50Q3ZCQ8 353 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 GPR107Q5VW38 600 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 OR8G5Q8NG78 346 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 RPL3LQ92901 407 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 TMEM106AQ96A25 262 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 NAA50Q9GZZ1 169 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 RBM38Q9H0Z9 239 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 MRPL15Q9P015 296 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 GPR160Q9UJ42 338 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 ENPP5Q9UJA9 477 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 SSR3Q9UNL2 185 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 CEPT1Q9Y6K0 416 aa11.55□□□□□ -0.56
SHKBP1-218ENST00000598907 DNAH3Q8TD57 4116 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 DPPA5A6NC42 116 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 H0YL77 283 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 AIREO43918 545 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 GABARAPO95166 117 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 FSTP19883 344 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 SELENOVP59797 346 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 CTF1Q16619 201 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 FAM27D1Q5T7N8 215 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 Q6ZR03 302 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 UTS2BQ765I0 119 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 SERPINA12Q8IW75 414 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 PP6455Q8WZ26 134 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 ELMOD3Q96FG2 381 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 CHCHD6Q9BRQ6 235 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 CENPOQ9BU64 300 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 CHST5Q9GZS9 411 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 OR5V1Q9UGF6 321 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 FOXJ3Q9UPW0 622 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 RHBDD3Q9Y3P4 386 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
SHKBP1-218ENST00000598907 A0A1W2PPK0 400 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 A6NHS1 94 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 A6NIN4 97 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 TIMM8AO60220 97 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 GMDSO60547 372 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 PLATP00750 562 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 ZNF20P17024 532 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 CD80P33681 288 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 TMBIM6P55061 237 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 UBE2V2Q15819 145 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 MOGQ16653 247 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 OXLD1Q5BKU9 147 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 CLVS2Q5SYC1 327 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 C22orf42Q6IC83 251 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 CLVS1Q8IUQ0 354 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 OR5AS1Q8N127 324 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 FTMTQ8N4E7 242 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 OR5D14Q8NGL3 314 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 ZNF420Q8TAQ5 688 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 ORAI1Q96D31 301 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 WWC2-AS2Q96NR7 200 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 BCL7BQ9BQE9 202 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 ZCCHC4Q9H5U6 513 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 RNF167Q9H6Y7 350 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 PPP1R3EQ9H7J1 279 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 PLEKHA1Q9HB21 404 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 NECAP2Q9NVZ3 263 aa11.53□□□□□ -0.56
SHKBP1-218ENST00000598907 DCAF16Q9NXF7 216 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms