RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ASB17Q8WXJ9 295 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 RFKQ969G6 155 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 ZDHHC16Q969W1 377 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 MND1Q9BWT6 205 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 H2AFY2Q9P0M6 372 aaPredicted RBP11.35□□□□□ -0.59
SCAF1-203ENST00000598359 ONECUT1Q9UBC0 465 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 NUFIP1Q9UHK0 495 aaKnown RBP11.35□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF391Q9UJN7 358 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 PIGLQ9Y2B2 252 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 TMEM14AQ9Y6G1 99 aa11.35□□□□□ -0.59
SCAF1-203ENST00000598359 A6NIN4 97 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ACOD1A6NK06 481 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 SLC22A31A6NKX4 558 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 H3BSH0 61 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 NDUFB3O43676 98 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF254O75437 659 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 IGLV3-1P01715 115 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 TTRP02766 147 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 LIPFP07098 398 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 OMGP23515 440 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 TGM4P49221 684 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 TMED1Q13445 227 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 DGUOKQ16854 277 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF829Q3KNS6 432 aaPredicted RBP11.34□□□□□ -0.59
SCAF1-203ENST00000598359 FAM76BQ5HYJ3 339 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 PLCXD3Q63HM9 321 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 SLC36A1Q7Z2H8 476 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 VMO1Q7Z5L0 202 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 GID4Q8IVV7 300 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 BATF2Q8N1L9 274 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 OR10Z1Q8NGY1 313 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 DYNC2LI1Q8TCX1 351 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 H1FXQ92522 213 aaKnown RBP11.34□□□□□ -0.59
SCAF1-203ENST00000598359 LGALS12Q96DT0 336 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ZNF488Q96MN9 340 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 GAFA1Q96PS6 74 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 OR5M11Q96RB7 305 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 MGLLQ99685 303 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 OR51I2Q9H344 312 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 CNTD2Q9H8S5 307 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ELL3Q9HB65 397 aaPredicted RBP11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ABCB9Q9NP78 766 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ISYNA1Q9NPH2 558 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 MRM2Q9UI43 246 aaKnown RBP11.34□□□□□ -0.59
SCAF1-203ENST00000598359 ERGIC3Q9Y282 383 aa11.34□□□□□ -0.59
SCAF1-203ENST00000598359 EXOGQ9Y2C4 368 aaKnown RBP11.34□□□□□ -0.59
SCAF1-203ENST00000598359 IGHV1-69DA0A0B4J2H0 117 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 A0A1W2PRD5 423 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 A0A1W2PRF3 423 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 A0A1W2PRM7 423 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF670-ZNF695F2Z2N8 137 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 LOC110117498-PIK3R3F6TDL0 507 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 CLDN34H7C241 214 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 CLPXO76031 633 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 RPP14O95059 124 aaKnown RBP11.33□□□□□ -0.6
SCAF1-203ENST00000598359 ECDO95905 644 aaPredicted RBP11.33□□□□□ -0.6
SCAF1-203ENST00000598359 IGHV1-69P01742 117 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 HTR1FP30939 366 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 GNG3P63215 75 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 RIPPLY1Q0D2K3 151 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 FOXL1Q12952 345 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 MLLT11Q13015 90 aaPredicted RBP11.33□□□□□ -0.6
SCAF1-203ENST00000598359 ODF4Q2M2E3 257 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 CEACAM21Q3KPI0 293 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 BCL2L15Q5TBC7 163 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 HAGHLQ6PII5 290 aaPredicted RBP11.33□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF788Q6ZQV5 615 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 LY6G5BQ8NDX9 201 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 ANGPTL6Q8NI99 470 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 GATAD2BQ8WXI9 593 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 OPALINQ96PE5 141 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 ZMAT3Q9HA38 289 aaKnown RBP11.33□□□□□ -0.6
SCAF1-203ENST00000598359 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 GPR173Q9NS66 373 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 OR52A1Q9UKL2 312 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 SLC22A13Q9Y226 551 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 EXOSC1Q9Y3B2 195 aaKnown RBP11.33□□□□□ -0.6
SCAF1-203ENST00000598359 R4GMQ9 66 aa11.33□□□□□ -0.6
SCAF1-203ENST00000598359 IGKV1D-17A0A075B6S4 117 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 A0A0U1RQK1 487 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 A0A1B0GTI1 187 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 NKX6-3A6NJ46 265 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 OR2AT4A6NND4 320 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 CCRL2O00421 344 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 AIREO43918 545 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 IGHA1P01876 353 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 MELTFP08582 738 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 GLRA1P23415 457 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 GADD45AP24522 165 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 GABRA2P47869 451 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 KLRD1Q13241 179 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 DOC2BQ14184 412 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 PDCD1Q15116 288 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 SPHARQ15513 63 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 TIMM50Q3ZCQ8 353 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 ATPAF1Q5TC12 328 aaPredicted RBP11.32□□□□□ -0.6
SCAF1-203ENST00000598359 C16orf87Q6PH81 154 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms